RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00055022380 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
33977 bases |
Strand |
Plus strand |
Position |
LUXU01084577.1 : 2813595 - 2847571 |
RNA binding domain |
RNA_pol_A_bac , RNA_pol_L |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00055034990 |
RNA_pol_A_bac |
PF01000 |
4.7e-29 |
1 |
ENSSSCP00055034990 |
RNA_pol_L |
PF01193 |
1e-23 |
2 |
ENSSSCP00055035401 |
RNA_pol_A_bac |
PF01000 |
5.3e-29 |
1 |
ENSSSCP00055035401 |
RNA_pol_L |
PF01193 |
1.3e-23 |
2 |
ENSSSCP00055035522 |
RNA_pol_A_bac |
PF01000 |
5.5e-29 |
1 |
ENSSSCP00055035522 |
RNA_pol_L |
PF01193 |
7.5e-12 |
2 |
ENSSSCP00055035760 |
RNA_pol_A_bac |
PF01000 |
6.1e-29 |
1 |
ENSSSCP00055035760 |
RNA_pol_L |
PF01193 |
1.5e-23 |
2 |
ENSSSCP00055035311 |
RNA_pol_A_bac |
PF01000 |
6.9e-29 |
1 |
ENSSSCP00055035311 |
RNA_pol_L |
PF01193 |
1.9e-23 |
2 |
ENSSSCP00055035656 |
RNA_pol_A_bac |
PF01000 |
5.2e-26 |
1 |
ENSSSCP00055035656 |
RNA_pol_L |
PF01193 |
1.2e-23 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00055043935 |
1238 |
291aa |
ENSSSCP00055034990 |
- |
ENSSSCT00055044316 |
5624 |
351aa |
ENSSSCP00055035311 |
- |
ENSSSCT00055044425 |
1316 |
310aa |
ENSSSCP00055035401 |
- |
ENSSSCT00055044579 |
933 |
311aa |
ENSSSCP00055035522 |
- |
ENSSSCT00055044746 |
891 |
296aa |
ENSSSCP00055035656 |
- |
ENSSSCT00055044887 |
999 |
332aa |
ENSSSCP00055035760 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00055022380 | sus_scrofa_pietrain | ENSSSCP00055043815 | 44.8845 | 25.4125 | sus_scrofa_pietrain | ENSSSCP00055035311 | 38.7464 | 21.9373 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00055022380 | sus_scrofa_pietrain | ENSSSCP00055035311 | 87.7493 | 86.0399 | sus_scrofa_largewhite | ENSSSCP00025019872 | 92.7711 | 90.9639 |
ENSSSCG00055022380 | sus_scrofa_pietrain | ENSSSCP00055035311 | 99.1453 | 99.1453 | sus_scrofa | ENSSSCP00000065382 | 99.1453 | 99.1453 |
ENSSSCG00055022380 | sus_scrofa_pietrain | ENSSSCP00055035311 | 93.7322 | 90.3134 | equus_caballus | ENSECAP00000070578 | 71.5217 | 68.913 |
ENSSSCG00055022380 | sus_scrofa_pietrain | ENSSSCP00055035311 | 99.7151 | 99.7151 | sus_scrofa_berkshire | ENSSSCP00065047353 | 99.7151 | 99.7151 |
ENSSSCG00055022380 | sus_scrofa_pietrain | ENSSSCP00055035311 | 99.7151 | 99.7151 | sus_scrofa_tibetan | ENSSSCP00015009303 | 99.7151 | 99.7151 |
ENSSSCG00055022380 | sus_scrofa_pietrain | ENSSSCP00055035311 | 99.7151 | 99.7151 | sus_scrofa_usmarc | ENSSSCP00070037542 | 99.7151 | 99.7151 |
ENSSSCG00055022380 | sus_scrofa_pietrain | ENSSSCP00055035311 | 96.5812 | 95.1567 | ovis_aries_rambouillet | ENSOARP00020028651 | 97.9769 | 96.5318 |
ENSSSCG00055022380 | sus_scrofa_pietrain | ENSSSCP00055035311 | 96.8661 | 95.1567 | bos_taurus | ENSBTAP00000025246 | 98.2659 | 96.5318 |
ENSSSCG00055022380 | sus_scrofa_pietrain | ENSSSCP00055035311 | 99.7151 | 99.7151 | sus_scrofa_wuzhishan | ENSSSCP00005031859 | 99.7151 | 99.7151 |
ENSSSCG00055022380 | sus_scrofa_pietrain | ENSSSCP00055035311 | 99.1453 | 99.1453 | sus_scrofa_meishan | ENSSSCP00040011729 | 99.1453 | 99.1453 |
ENSSSCG00055022380 | sus_scrofa_pietrain | ENSSSCP00055035311 | 87.7493 | 86.0399 | sus_scrofa_bamei | ENSSSCP00050001473 | 92.7711 | 90.9639 |
ENSSSCG00055022380 | sus_scrofa_pietrain | ENSSSCP00055035311 | 87.1795 | 85.4701 | sus_scrofa_jinhua | ENSSSCP00060017870 | 92.1687 | 90.3614 |
ENSSSCG00055022380 | sus_scrofa_pietrain | ENSSSCP00055035311 | 87.7493 | 86.0399 | sus_scrofa_landrace | ENSSSCP00045033443 | 92.7711 | 90.9639 |
ENSSSCG00055022380 | sus_scrofa_pietrain | ENSSSCP00055035311 | 99.7151 | 99.7151 | sus_scrofa_hampshire | ENSSSCP00035041406 | 99.7151 | 99.7151 |
ENSSSCG00055022380 | sus_scrofa_pietrain | ENSSSCP00055035311 | 93.7322 | 93.1624 | sus_scrofa_rongchang | ENSSSCP00030037150 | 97.6261 | 97.0326 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |