| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00055022075 | Gene ID |
100153708 |
Accession |
- |
| Symbol |
ATXN2 |
Alias |
- |
Full Name |
ataxin 2 |
| Status |
Confidence |
Length |
115348 bases |
Strand |
Minus strand |
| Position |
LUXU01014109.1 : 825046 - 940393 |
RNA binding domain |
LsmAD , PAM2 , SM-ATX |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00055036054 |
LsmAD |
PF06741 |
2.7e-15 |
1 |
| ENSSSCP00055036054 |
PAM2 |
PF07145 |
6.5e-06 |
2 |
| ENSSSCP00055036054 |
SM-ATX |
PF14438 |
9.7e-21 |
3 |
| ENSSSCP00055036785 |
LsmAD |
PF06741 |
3.1e-15 |
1 |
| ENSSSCP00055036785 |
PAM2 |
PF07145 |
7e-06 |
2 |
| ENSSSCP00055036785 |
SM-ATX |
PF14438 |
1.1e-20 |
3 |
| ENSSSCP00055036522 |
LsmAD |
PF06741 |
3.4e-15 |
1 |
| ENSSSCP00055036522 |
PAM2 |
PF07145 |
7.4e-06 |
2 |
| ENSSSCP00055036522 |
SM-ATX |
PF14438 |
1.1e-20 |
3 |
| ENSSSCP00055036254 |
LsmAD |
PF06741 |
3.4e-15 |
1 |
| ENSSSCP00055036254 |
PAM2 |
PF07145 |
7.5e-06 |
2 |
| ENSSSCP00055036254 |
SM-ATX |
PF14438 |
1.1e-20 |
3 |
| ENSSSCP00055035437 |
LsmAD |
PF06741 |
3.4e-15 |
1 |
| ENSSSCP00055035437 |
PAM2 |
PF07145 |
7.5e-06 |
2 |
| ENSSSCP00055035437 |
SM-ATX |
PF14438 |
1.2e-20 |
3 |
| ENSSSCP00055035183 |
LsmAD |
PF06741 |
3.6e-15 |
1 |
| ENSSSCP00055035183 |
PAM2 |
PF07145 |
7.6e-06 |
2 |
| ENSSSCP00055035183 |
SM-ATX |
PF14438 |
1.2e-20 |
3 |
| ENSSSCP00055035736 |
LsmAD |
PF06741 |
3.7e-15 |
1 |
| ENSSSCP00055035736 |
PAM2 |
PF07145 |
7.9e-06 |
2 |
| ENSSSCP00055035736 |
SM-ATX |
PF14438 |
1.3e-20 |
3 |
| ENSSSCP00055034991 |
LsmAD |
PF06741 |
3.7e-15 |
1 |
| ENSSSCP00055034991 |
PAM2 |
PF07145 |
7.7e-06 |
2 |
| ENSSSCP00055034991 |
SM-ATX |
PF14438 |
1.2e-20 |
3 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| ATXN2-202 |
ENSSSCT00055043938 |
5476 |
1177aa |
ENSSSCP00055034991 |
| ATXN2-203 |
ENSSSCT00055044172 |
5434 |
1163aa |
ENSSSCP00055035183 |
| ATXN2-201 |
ENSSSCT00055044468 |
5556 |
1155aa |
ENSSSCP00055035437 |
| ATXN2-204 |
ENSSSCT00055044853 |
4147 |
1203aa |
ENSSSCP00055035736 |
| ATXN2-205 |
ENSSSCT00055045247 |
6310 |
1008aa |
ENSSSCP00055036054 |
| ATXN2-206 |
ENSSSCT00055045484 |
4536 |
1158aa |
ENSSSCP00055036254 |
| ATXN2-207 |
ENSSSCT00055045801 |
4485 |
1141aa |
ENSSSCP00055036522 |
| ATXN2-208 |
ENSSSCT00055046130 |
6164 |
1078aa |
ENSSSCP00055036785 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00055022075 | sus_scrofa_pietrain | ENSSSCP00055049084 | 50.7678 | 36.766 | sus_scrofa_pietrain | ENSSSCP00055035736 | 46.7165 | 33.8321 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00055022075 | sus_scrofa_pietrain | ENSSSCP00055035736 | 99.9169 | 99.9169 | sus_scrofa_largewhite | ENSSSCP00025011137 | 99.9169 | 99.9169 |
| ENSSSCG00055022075 | sus_scrofa_pietrain | ENSSSCP00055035736 | 98.3375 | 97.7556 | sus_scrofa | ENSSSCP00000031182 | 88.6142 | 88.0899 |
| ENSSSCG00055022075 | sus_scrofa_pietrain | ENSSSCP00055035736 | 83.7074 | 81.8786 | equus_caballus | ENSECAP00000026122 | 85.9215 | 84.0444 |
| ENSSSCG00055022075 | sus_scrofa_pietrain | ENSSSCP00055035736 | 99.9169 | 99.9169 | sus_scrofa_berkshire | ENSSSCP00065047859 | 99.9169 | 99.9169 |
| ENSSSCG00055022075 | sus_scrofa_pietrain | ENSSSCP00055035736 | 81.0474 | 79.9668 | sus_scrofa_tibetan | ENSSSCP00015025251 | 82.8377 | 81.7332 |
| ENSSSCG00055022075 | sus_scrofa_pietrain | ENSSSCP00055035736 | 98.3375 | 97.7556 | sus_scrofa_usmarc | ENSSSCP00070021896 | 91.0701 | 90.5312 |
| ENSSSCG00055022075 | sus_scrofa_pietrain | ENSSSCP00055035736 | 93.9318 | 91.9368 | ovis_aries_rambouillet | ENSOARP00020022647 | 88.4194 | 86.5415 |
| ENSSSCG00055022075 | sus_scrofa_pietrain | ENSSSCP00055035736 | 95.4281 | 93.2668 | bos_taurus | ENSBTAP00000029618 | 87.3668 | 85.3881 |
| ENSSSCG00055022075 | sus_scrofa_pietrain | ENSSSCP00055035736 | 75.478 | 74.8961 | sus_scrofa_wuzhishan | ENSSSCP00005015072 | 71.4961 | 70.9449 |
| ENSSSCG00055022075 | sus_scrofa_pietrain | ENSSSCP00055035736 | 98.2544 | 97.6725 | sus_scrofa_meishan | ENSSSCP00040002832 | 90.9931 | 90.4542 |
| ENSSSCG00055022075 | sus_scrofa_pietrain | ENSSSCP00055035736 | 99.9169 | 99.9169 | sus_scrofa_bamei | ENSSSCP00050001657 | 99.9169 | 99.9169 |
| ENSSSCG00055022075 | sus_scrofa_pietrain | ENSSSCP00055035736 | 99.9169 | 99.9169 | sus_scrofa_jinhua | ENSSSCP00060024678 | 99.9169 | 99.9169 |
| ENSSSCG00055022075 | sus_scrofa_pietrain | ENSSSCP00055035736 | 99.9169 | 99.9169 | sus_scrofa_landrace | ENSSSCP00045037604 | 99.9169 | 99.9169 |
| ENSSSCG00055022075 | sus_scrofa_pietrain | ENSSSCP00055035736 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035041437 | 100 | 100 |
| ENSSSCG00055022075 | sus_scrofa_pietrain | ENSSSCP00055035736 | 99.9169 | 99.9169 | sus_scrofa_rongchang | ENSSSCP00030036854 | 99.9169 | 99.9169 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
