RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00055018038	Gene ID		Accession	-
Symbol	SLU7	Alias	-	Full Name	NA
Status	Confidence	Length	20863 bases	Strand	Minus strand
Position	LUXU01053148.1 : 670852 - 691714	RNA binding domain	Slu7
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00055028131	Slu7	PF11708	8e-110	1
ENSSSCP00055028036	Slu7	PF11708	8.9e-110	1
ENSSSCP00055028230	Slu7	PF11708	8.6e-14	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
SLU7-201	ENSSSCT00055035306	7150	586aa	ENSSSCP00055028036
SLU7-202	ENSSSCT00055035421	1864	561aa	ENSSSCP00055028131
SLU7-203	ENSSSCT00055035533	2747	227aa	ENSSSCP00055028230

Gene Model

Click here to download ENSSSCG00055018038's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00055018038's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00055018038

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00055018038	sus_scrofa_pietrain	ENSSSCP00055028036	100	100	sus_scrofa_largewhite	ENSSSCP00025016735	100	100
ENSSSCG00055018038	sus_scrofa_pietrain	ENSSSCP00055028036	100	100	sus_scrofa	ENSSSCP00000018045	100	100
ENSSSCG00055018038	sus_scrofa_pietrain	ENSSSCP00055028036	99.4881	97.6109	equus_caballus	ENSECAP00000059090	99.4881	97.6109
ENSSSCG00055018038	sus_scrofa_pietrain	ENSSSCP00055028036	100	100	sus_scrofa_berkshire	ENSSSCP00065012170	100	100
ENSSSCG00055018038	sus_scrofa_pietrain	ENSSSCP00055028036	100	100	sus_scrofa_tibetan	ENSSSCP00015026071	100	100
ENSSSCG00055018038	sus_scrofa_pietrain	ENSSSCP00055028036	100	100	sus_scrofa_usmarc	ENSSSCP00070021681	100	100
ENSSSCG00055018038	sus_scrofa_pietrain	ENSSSCP00055028036	99.6587	98.6348	ovis_aries_rambouillet	ENSOARP00020012606	99.6587	98.6348
ENSSSCG00055018038	sus_scrofa_pietrain	ENSSSCP00055028036	99.4881	98.4642	bos_taurus	ENSBTAP00000011131	99.4881	98.4642
ENSSSCG00055018038	sus_scrofa_pietrain	ENSSSCP00055028036	100	100	sus_scrofa_wuzhishan	ENSSSCP00005043274	100	100
ENSSSCG00055018038	sus_scrofa_pietrain	ENSSSCP00055028036	100	100	sus_scrofa_meishan	ENSSSCP00040036474	100	100
ENSSSCG00055018038	sus_scrofa_pietrain	ENSSSCP00055028036	100	100	sus_scrofa_bamei	ENSSSCP00050039878	100	100
ENSSSCG00055018038	sus_scrofa_pietrain	ENSSSCP00055028036	100	100	sus_scrofa_jinhua	ENSSSCP00060011244	100	100
ENSSSCG00055018038	sus_scrofa_pietrain	ENSSSCP00055028036	100	100	sus_scrofa_landrace	ENSSSCP00045021245	100	100
ENSSSCG00055018038	sus_scrofa_pietrain	ENSSSCP00055028036	100	100	sus_scrofa_hampshire	ENSSSCP00035023567	100	100
ENSSSCG00055018038	sus_scrofa_pietrain	ENSSSCP00055028036	100	100	sus_scrofa_rongchang	ENSSSCP00030040370	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression