RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00055014213 | Gene ID |
100517817 |
Accession |
- |
Symbol |
GSPT1 |
Alias |
- |
Full Name |
G1 to S phase transition 1 |
Status |
Confidence |
Length |
36632 bases |
Strand |
Minus strand |
Position |
LUXU01070408.1 : 1594007 - 1630638 |
RNA binding domain |
GTP_EFTU , PAM2 , GTP_EFTU_D3 , GTP_EFTU_D2 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00055022437 |
GTP_EFTU |
PF00009 |
1.8e-45 |
1 |
ENSSSCP00055022437 |
PAM2 |
PF07145 |
2.4e-06 |
2 |
ENSSSCP00055022437 |
GTP_EFTU_D3 |
PF03143 |
2e-24 |
3 |
ENSSSCP00055022437 |
GTP_EFTU_D2 |
PF03144 |
2.5e-07 |
4 |
ENSSSCP00055022369 |
GTP_EFTU |
PF00009 |
1.8e-45 |
1 |
ENSSSCP00055022369 |
PAM2 |
PF07145 |
2.4e-06 |
2 |
ENSSSCP00055022369 |
GTP_EFTU_D3 |
PF03143 |
1.8e-24 |
3 |
ENSSSCP00055022369 |
GTP_EFTU_D2 |
PF03144 |
2.5e-07 |
4 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
GSPT1-201 |
ENSSSCT00055028074 |
6677 |
640aa |
ENSSSCP00055022369 |
GSPT1-202 |
ENSSSCT00055028158 |
6459 |
639aa |
ENSSSCP00055022437 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055034375 | 90.6646 | 88.1329 | sus_scrofa_pietrain | ENSSSCP00055022369 | 89.5312 | 87.0312 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055001395 | 15.8505 | 8.76289 | sus_scrofa_pietrain | ENSSSCP00055022369 | 19.2188 | 10.625 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055035278 | 34.629 | 21.0247 | sus_scrofa_pietrain | ENSSSCP00055022369 | 30.625 | 18.5938 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055033735 | 28.6585 | 13.4146 | sus_scrofa_pietrain | ENSSSCP00055022369 | 7.34375 | 3.4375 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055014232 | 30.9322 | 14.8305 | sus_scrofa_pietrain | ENSSSCP00055022369 | 22.8125 | 10.9375 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055008918 | 19.0537 | 10.3581 | sus_scrofa_pietrain | ENSSSCP00055022369 | 23.2812 | 12.6562 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055033019 | 14.4643 | 5.80357 | sus_scrofa_pietrain | ENSSSCP00055022369 | 25.3125 | 10.1562 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055036196 | 16.9796 | 9.87755 | sus_scrofa_pietrain | ENSSSCP00055022369 | 32.5 | 18.9062 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055034281 | 46.6472 | 30.4665 | sus_scrofa_pietrain | ENSSSCP00055022369 | 50 | 32.6562 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055041212 | 17.5991 | 8.39161 | sus_scrofa_pietrain | ENSSSCP00055022369 | 23.5938 | 11.25 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055019998 | 29.5964 | 16.8909 | sus_scrofa_pietrain | ENSSSCP00055022369 | 30.9375 | 17.6562 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055014851 | 48.9152 | 31.1637 | sus_scrofa_pietrain | ENSSSCP00055022369 | 38.75 | 24.6875 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055018811 | 49.8008 | 32.2709 | sus_scrofa_pietrain | ENSSSCP00055022369 | 39.0625 | 25.3125 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055028847 | 21.2257 | 11.9581 | sus_scrofa_pietrain | ENSSSCP00055022369 | 22.1875 | 12.5 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055028948 | 16.1708 | 8.53816 | sus_scrofa_pietrain | ENSSSCP00055022369 | 19.5312 | 10.3125 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055031772 | 56.3991 | 35.3579 | sus_scrofa_pietrain | ENSSSCP00055022369 | 40.625 | 25.4688 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055002816 | 24.3034 | 12.6935 | sus_scrofa_pietrain | ENSSSCP00055022369 | 24.5312 | 12.8125 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055038616 | 33.2226 | 19.2691 | sus_scrofa_pietrain | ENSSSCP00055022369 | 31.25 | 18.125 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055045027 | 23.0769 | 11.9363 | sus_scrofa_pietrain | ENSSSCP00055022369 | 27.1875 | 14.0625 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055022369 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025011553 | 100 | 100 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055022369 | 100 | 100 | sus_scrofa | ENSSSCP00000025680 | 100 | 100 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055022369 | 77.1875 | 76.875 | equus_caballus | ENSECAP00000019057 | 98.998 | 98.5972 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055022369 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065045325 | 100 | 100 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055022369 | 93.5938 | 93.5938 | sus_scrofa_tibetan | ENSSSCP00015024899 | 93.5938 | 93.5938 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055022369 | 100 | 100 | sus_scrofa_usmarc | ENSSSCP00070043538 | 100 | 100 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055022369 | 97.8125 | 97.5 | ovis_aries_rambouillet | ENSOARP00020023293 | 97.9656 | 97.6526 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055022369 | 97.8125 | 97.5 | bos_taurus | ENSBTAP00000004656 | 98.4277 | 98.1132 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055022369 | 81.25 | 81.25 | sus_scrofa_wuzhishan | ENSSSCP00005025555 | 81.5047 | 81.5047 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055022369 | 100 | 100 | sus_scrofa_meishan | ENSSSCP00040007896 | 100 | 100 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055022369 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050047302 | 100 | 100 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055022369 | 100 | 100 | sus_scrofa_jinhua | ENSSSCP00060010377 | 100 | 100 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055022369 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045011121 | 100 | 100 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055022369 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035025352 | 100 | 100 |
ENSSSCG00055014213 | sus_scrofa_pietrain | ENSSSCP00055022369 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030021302 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |