Description

Ensembl ID ENSSSCG00055014213 Gene ID 100517817 Accession -
Symbol GSPT1 Alias - Full Name G1 to S phase transition 1
Status Confidence Length 36632 bases Strand Minus strand
Position LUXU01070408.1 : 1594007 - 1630638 RNA binding domain GTP_EFTU , PAM2 , GTP_EFTU_D3 , GTP_EFTU_D2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00055022437 GTP_EFTU PF00009 1.8e-45 1
ENSSSCP00055022437 PAM2 PF07145 2.4e-06 2
ENSSSCP00055022437 GTP_EFTU_D3 PF03143 2e-24 3
ENSSSCP00055022437 GTP_EFTU_D2 PF03144 2.5e-07 4
ENSSSCP00055022369 GTP_EFTU PF00009 1.8e-45 1
ENSSSCP00055022369 PAM2 PF07145 2.4e-06 2
ENSSSCP00055022369 GTP_EFTU_D3 PF03143 1.8e-24 3
ENSSSCP00055022369 GTP_EFTU_D2 PF03144 2.5e-07 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
GSPT1-201 ENSSSCT00055028074 6677 640aa ENSSSCP00055022369
GSPT1-202 ENSSSCT00055028158 6459 639aa ENSSSCP00055022437

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005503437590.664688.1329sus_scrofa_pietrainENSSSCP0005502236989.531287.0312
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005500139515.85058.76289sus_scrofa_pietrainENSSSCP0005502236919.218810.625
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005503527834.62921.0247sus_scrofa_pietrainENSSSCP0005502236930.62518.5938
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005503373528.658513.4146sus_scrofa_pietrainENSSSCP000550223697.343753.4375
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005501423230.932214.8305sus_scrofa_pietrainENSSSCP0005502236922.812510.9375
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005500891819.053710.3581sus_scrofa_pietrainENSSSCP0005502236923.281212.6562
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005503301914.46435.80357sus_scrofa_pietrainENSSSCP0005502236925.312510.1562
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005503619616.97969.87755sus_scrofa_pietrainENSSSCP0005502236932.518.9062
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005503428146.647230.4665sus_scrofa_pietrainENSSSCP000550223695032.6562
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005504121217.59918.39161sus_scrofa_pietrainENSSSCP0005502236923.593811.25
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005501999829.596416.8909sus_scrofa_pietrainENSSSCP0005502236930.937517.6562
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005501485148.915231.1637sus_scrofa_pietrainENSSSCP0005502236938.7524.6875
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005501881149.800832.2709sus_scrofa_pietrainENSSSCP0005502236939.062525.3125
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005502884721.225711.9581sus_scrofa_pietrainENSSSCP0005502236922.187512.5
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005502894816.17088.53816sus_scrofa_pietrainENSSSCP0005502236919.531210.3125
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005503177256.399135.3579sus_scrofa_pietrainENSSSCP0005502236940.62525.4688
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005500281624.303412.6935sus_scrofa_pietrainENSSSCP0005502236924.531212.8125
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005503861633.222619.2691sus_scrofa_pietrainENSSSCP0005502236931.2518.125
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005504502723.076911.9363sus_scrofa_pietrainENSSSCP0005502236927.187514.0625

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP00055022369100100sus_scrofa_largewhiteENSSSCP00025011553100100
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP00055022369100100sus_scrofaENSSSCP00000025680100100
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005502236977.187576.875equus_caballusENSECAP0000001905798.99898.5972
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP00055022369100100sus_scrofa_berkshireENSSSCP00065045325100100
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005502236993.593893.5938sus_scrofa_tibetanENSSSCP0001502489993.593893.5938
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP00055022369100100sus_scrofa_usmarcENSSSCP00070043538100100
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005502236997.812597.5ovis_aries_rambouilletENSOARP0002002329397.965697.6526
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005502236997.812597.5bos_taurusENSBTAP0000000465698.427798.1132
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP0005502236981.2581.25sus_scrofa_wuzhishanENSSSCP0000502555581.504781.5047
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP00055022369100100sus_scrofa_meishanENSSSCP00040007896100100
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP00055022369100100sus_scrofa_bameiENSSSCP00050047302100100
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP00055022369100100sus_scrofa_jinhuaENSSSCP00060010377100100
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP00055022369100100sus_scrofa_landraceENSSSCP00045011121100100
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP00055022369100100sus_scrofa_hampshireENSSSCP00035025352100100
ENSSSCG00055014213sus_scrofa_pietrainENSSSCP00055022369100100sus_scrofa_rongchangENSSSCP00030021302100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression