RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00055012725 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
19980 bases |
Strand |
Plus strand |
Position |
LUXU01084577.1 : 664990 - 684969 |
RNA binding domain |
APOBEC_N , APOBEC_C |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00055019896 |
APOBEC_N |
PF08210 |
3.2e-54 |
1 |
ENSSSCP00055019896 |
APOBEC_C |
PF05240 |
3.8e-24 |
2 |
ENSSSCP00055019876 |
APOBEC_N |
PF08210 |
4.9e-54 |
1 |
ENSSSCP00055019876 |
APOBEC_C |
PF05240 |
5e-24 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00055025029 |
6834 |
224aa |
ENSSSCP00055019876 |
- |
ENSSSCT00055025054 |
6988 |
199aa |
ENSSSCP00055019896 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00055012725 | sus_scrofa_pietrain | ENSSSCP00055025184 | 30.4183 | 16.73 | sus_scrofa_pietrain | ENSSSCP00055019876 | 35.7143 | 19.6429 |
ENSSSCG00055012725 | sus_scrofa_pietrain | ENSSSCP00055025086 | 45.6853 | 31.4721 | sus_scrofa_pietrain | ENSSSCP00055019876 | 40.1786 | 27.6786 |
ENSSSCG00055012725 | sus_scrofa_pietrain | ENSSSCP00055018929 | 22.7273 | 13.1579 | sus_scrofa_pietrain | ENSSSCP00055019876 | 42.4107 | 24.5536 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00055012725 | sus_scrofa_pietrain | ENSSSCP00055019876 | 99.5536 | 99.5536 | sus_scrofa_largewhite | ENSSSCP00025034608 | 99.5536 | 99.5536 |
ENSSSCG00055012725 | sus_scrofa_pietrain | ENSSSCP00055019876 | 99.5536 | 99.5536 | sus_scrofa | ENSSSCP00000051641 | 99.5536 | 99.5536 |
ENSSSCG00055012725 | sus_scrofa_pietrain | ENSSSCP00055019876 | 99.5536 | 99.5536 | sus_scrofa_berkshire | ENSSSCP00065043077 | 99.5536 | 99.5536 |
ENSSSCG00055012725 | sus_scrofa_pietrain | ENSSSCP00055019876 | 99.5536 | 99.5536 | sus_scrofa_tibetan | ENSSSCP00015004705 | 99.5536 | 99.5536 |
ENSSSCG00055012725 | sus_scrofa_pietrain | ENSSSCP00055019876 | 99.5536 | 99.5536 | sus_scrofa_usmarc | ENSSSCP00070003559 | 99.5536 | 99.5536 |
ENSSSCG00055012725 | sus_scrofa_pietrain | ENSSSCP00055019876 | 96.875 | 90.625 | ovis_aries_rambouillet | ENSOARP00020017765 | 96.875 | 90.625 |
ENSSSCG00055012725 | sus_scrofa_pietrain | ENSSSCP00055019876 | 96.4286 | 90.625 | bos_taurus | ENSBTAP00000035907 | 69.0096 | 64.8562 |
ENSSSCG00055012725 | sus_scrofa_pietrain | ENSSSCP00055019876 | 99.5536 | 99.5536 | sus_scrofa_wuzhishan | ENSSSCP00005040050 | 99.5536 | 99.5536 |
ENSSSCG00055012725 | sus_scrofa_pietrain | ENSSSCP00055019876 | 99.5536 | 99.5536 | sus_scrofa_meishan | ENSSSCP00040033257 | 99.5536 | 99.5536 |
ENSSSCG00055012725 | sus_scrofa_pietrain | ENSSSCP00055019876 | 99.5536 | 99.5536 | sus_scrofa_bamei | ENSSSCP00050002969 | 99.5536 | 99.5536 |
ENSSSCG00055012725 | sus_scrofa_pietrain | ENSSSCP00055019876 | 99.5536 | 99.5536 | sus_scrofa_jinhua | ENSSSCP00060031863 | 99.5536 | 99.5536 |
ENSSSCG00055012725 | sus_scrofa_pietrain | ENSSSCP00055019876 | 99.5536 | 99.5536 | sus_scrofa_landrace | ENSSSCP00045014379 | 99.5536 | 99.5536 |
ENSSSCG00055012725 | sus_scrofa_pietrain | ENSSSCP00055019876 | 99.5536 | 99.5536 | sus_scrofa_hampshire | ENSSSCP00035010727 | 99.5536 | 99.5536 |
ENSSSCG00055012725 | sus_scrofa_pietrain | ENSSSCP00055019876 | 99.5536 | 99.5536 | sus_scrofa_rongchang | ENSSSCP00030035430 | 99.5536 | 99.5536 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |