Description

Ensembl ID ENSSSCG00055012725 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 19980 bases Strand Plus strand
Position LUXU01084577.1 : 664990 - 684969 RNA binding domain APOBEC_N , APOBEC_C
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00055019896 APOBEC_N PF08210 3.2e-54 1
ENSSSCP00055019896 APOBEC_C PF05240 3.8e-24 2
ENSSSCP00055019876 APOBEC_N PF08210 4.9e-54 1
ENSSSCP00055019876 APOBEC_C PF05240 5e-24 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00055025029 6834 224aa ENSSSCP00055019876
- ENSSSCT00055025054 6988 199aa ENSSSCP00055019896

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00055012725sus_scrofa_pietrainENSSSCP0005502518430.418316.73sus_scrofa_pietrainENSSSCP0005501987635.714319.6429
ENSSSCG00055012725sus_scrofa_pietrainENSSSCP0005502508645.685331.4721sus_scrofa_pietrainENSSSCP0005501987640.178627.6786
ENSSSCG00055012725sus_scrofa_pietrainENSSSCP0005501892922.727313.1579sus_scrofa_pietrainENSSSCP0005501987642.410724.5536

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00055012725sus_scrofa_pietrainENSSSCP0005501987699.553699.5536sus_scrofa_largewhiteENSSSCP0002503460899.553699.5536
ENSSSCG00055012725sus_scrofa_pietrainENSSSCP0005501987699.553699.5536sus_scrofaENSSSCP0000005164199.553699.5536
ENSSSCG00055012725sus_scrofa_pietrainENSSSCP0005501987699.553699.5536sus_scrofa_berkshireENSSSCP0006504307799.553699.5536
ENSSSCG00055012725sus_scrofa_pietrainENSSSCP0005501987699.553699.5536sus_scrofa_tibetanENSSSCP0001500470599.553699.5536
ENSSSCG00055012725sus_scrofa_pietrainENSSSCP0005501987699.553699.5536sus_scrofa_usmarcENSSSCP0007000355999.553699.5536
ENSSSCG00055012725sus_scrofa_pietrainENSSSCP0005501987696.87590.625ovis_aries_rambouilletENSOARP0002001776596.87590.625
ENSSSCG00055012725sus_scrofa_pietrainENSSSCP0005501987696.428690.625bos_taurusENSBTAP0000003590769.009664.8562
ENSSSCG00055012725sus_scrofa_pietrainENSSSCP0005501987699.553699.5536sus_scrofa_wuzhishanENSSSCP0000504005099.553699.5536
ENSSSCG00055012725sus_scrofa_pietrainENSSSCP0005501987699.553699.5536sus_scrofa_meishanENSSSCP0004003325799.553699.5536
ENSSSCG00055012725sus_scrofa_pietrainENSSSCP0005501987699.553699.5536sus_scrofa_bameiENSSSCP0005000296999.553699.5536
ENSSSCG00055012725sus_scrofa_pietrainENSSSCP0005501987699.553699.5536sus_scrofa_jinhuaENSSSCP0006003186399.553699.5536
ENSSSCG00055012725sus_scrofa_pietrainENSSSCP0005501987699.553699.5536sus_scrofa_landraceENSSSCP0004501437999.553699.5536
ENSSSCG00055012725sus_scrofa_pietrainENSSSCP0005501987699.553699.5536sus_scrofa_hampshireENSSSCP0003501072799.553699.5536
ENSSSCG00055012725sus_scrofa_pietrainENSSSCP0005501987699.553699.5536sus_scrofa_rongchangENSSSCP0003003543099.553699.5536

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression