Description

Ensembl ID ENSSSCG00055012454 Gene ID Accession -
Symbol PRPF19 Alias - Full Name NA
Status Confidence Length 9266 bases Strand Plus strand
Position LUXU01080980.1 : 86145 - 95410 RNA binding domain Prp19
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00055019848 Prp19 PF08606 9.9e-33 1
ENSSSCP00055019743 Prp19 PF08606 9.9e-33 1
ENSSSCP00055019931 Prp19 PF08606 1.2e-32 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
PRPF19-201 ENSSSCT00055024866 2296 504aa ENSSSCP00055019743
PRPF19-202 ENSSSCT00055024995 2072 502aa ENSSSCP00055019848
PRPF19-203 ENSSSCT00055025093 1997 477aa ENSSSCP00055019931

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00055012454sus_scrofa_pietrainENSSSCP0005503977824.245811.8436sus_scrofa_pietrainENSSSCP0005501974343.055621.0317

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00055012454sus_scrofa_pietrainENSSSCP00055019743100100sus_scrofa_largewhiteENSSSCP00025024872100100
ENSSSCG00055012454sus_scrofa_pietrainENSSSCP0005501974310099.8016sus_scrofaENSSSCP0000008120899.408399.211
ENSSSCG00055012454sus_scrofa_pietrainENSSSCP0005501974310099.6032equus_caballusENSECAP0000000587610099.6032
ENSSSCG00055012454sus_scrofa_pietrainENSSSCP0005501974378.968376.3889sus_scrofa_berkshireENSSSCP0006501175377.886575.3425
ENSSSCG00055012454sus_scrofa_pietrainENSSSCP00055019743100100sus_scrofa_tibetanENSSSCP00015020049100100
ENSSSCG00055012454sus_scrofa_pietrainENSSSCP0005501974310099.8016sus_scrofa_usmarcENSSSCP0007004298999.408399.211
ENSSSCG00055012454sus_scrofa_pietrainENSSSCP0005501974310099.8016ovis_aries_rambouilletENSOARP0002001935810099.8016
ENSSSCG00055012454sus_scrofa_pietrainENSSSCP0005501974310099.8016bos_taurusENSBTAP0000001910010099.8016
ENSSSCG00055012454sus_scrofa_pietrainENSSSCP00055019743100100sus_scrofa_wuzhishanENSSSCP00005042526100100
ENSSSCG00055012454sus_scrofa_pietrainENSSSCP00055019743100100sus_scrofa_meishanENSSSCP00040021879100100
ENSSSCG00055012454sus_scrofa_pietrainENSSSCP00055019743100100sus_scrofa_bameiENSSSCP00050028227100100
ENSSSCG00055012454sus_scrofa_pietrainENSSSCP00055019743100100sus_scrofa_jinhuaENSSSCP00060040790100100
ENSSSCG00055012454sus_scrofa_pietrainENSSSCP00055019743100100sus_scrofa_landraceENSSSCP00045032830100100
ENSSSCG00055012454sus_scrofa_pietrainENSSSCP00055019743100100sus_scrofa_hampshireENSSSCP00035037632100100
ENSSSCG00055012454sus_scrofa_pietrainENSSSCP00055019743100100sus_scrofa_rongchangENSSSCP00030048284100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression