RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSSSCG00055010041	Gene ID		Accession	-
Symbol	ELAVL4	Alias	-	Full Name	NA
Status	Confidence	Length	142642 bases	Strand	Plus strand
Position	LUXU01036726.1 : 2111782 - 2254423	RNA binding domain	RRM_5 , RRM_1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00055015833	RRM_5	PF13893	1.9e-12	1
ENSSSCP00055015833	RRM_5	PF13893	1.9e-12	2
ENSSSCP00055015833	RRM_1	PF00076	1.4e-65	3
ENSSSCP00055015833	RRM_1	PF00076	1.4e-65	4
ENSSSCP00055015833	RRM_1	PF00076	1.4e-65	5
ENSSSCP00055015613	RRM_5	PF13893	2e-12	1
ENSSSCP00055015613	RRM_5	PF13893	2e-12	2
ENSSSCP00055015613	RRM_1	PF00076	1.6e-65	3
ENSSSCP00055015613	RRM_1	PF00076	1.6e-65	4
ENSSSCP00055015613	RRM_1	PF00076	1.6e-65	5
ENSSSCP00055015870	RRM_5	PF13893	2.1e-12	1
ENSSSCP00055015870	RRM_5	PF13893	2.1e-12	2
ENSSSCP00055015870	RRM_1	PF00076	1.6e-65	3
ENSSSCP00055015870	RRM_1	PF00076	1.6e-65	4
ENSSSCP00055015870	RRM_1	PF00076	1.6e-65	5
ENSSSCP00055015584	RRM_5	PF13893	2.1e-12	1
ENSSSCP00055015584	RRM_5	PF13893	2.1e-12	2
ENSSSCP00055015584	RRM_1	PF00076	1.6e-65	3
ENSSSCP00055015584	RRM_1	PF00076	1.6e-65	4
ENSSSCP00055015584	RRM_1	PF00076	1.6e-65	5
ENSSSCP00055015812	RRM_5	PF13893	2.3e-12	1
ENSSSCP00055015812	RRM_5	PF13893	2.3e-12	2
ENSSSCP00055015812	RRM_1	PF00076	1.9e-65	3
ENSSSCP00055015812	RRM_1	PF00076	1.9e-65	4
ENSSSCP00055015812	RRM_1	PF00076	1.9e-65	5
ENSSSCP00055015748	RRM_5	PF13893	2.4e-12	1
ENSSSCP00055015748	RRM_5	PF13893	2.4e-12	2
ENSSSCP00055015748	RRM_1	PF00076	1.8e-65	3
ENSSSCP00055015748	RRM_1	PF00076	1.8e-65	4
ENSSSCP00055015748	RRM_1	PF00076	1.8e-65	5
ENSSSCP00055015726	RRM_5	PF13893	2.5e-12	1
ENSSSCP00055015726	RRM_5	PF13893	2.5e-12	2
ENSSSCP00055015726	RRM_1	PF00076	2e-65	3
ENSSSCP00055015726	RRM_1	PF00076	2e-65	4
ENSSSCP00055015726	RRM_1	PF00076	2e-65	5
ENSSSCP00055015773	RRM_5	PF13893	3.2e-12	1
ENSSSCP00055015773	RRM_5	PF13893	3.2e-12	2
ENSSSCP00055015773	RRM_1	PF00076	2.4e-65	3
ENSSSCP00055015773	RRM_1	PF00076	2.4e-65	4
ENSSSCP00055015773	RRM_1	PF00076	2.4e-65	5

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
ELAVL4-201	ENSSSCT00055019754	1553	369aa	ENSSSCP00055015584
ELAVL4-202	ENSSSCT00055019790	1520	366aa	ENSSSCP00055015613
ELAVL4-204	ENSSSCT00055019926	1815	385aa	ENSSSCP00055015726
ELAVL4-203	ENSSSCT00055019955	1594	379aa	ENSSSCP00055015748
ELAVL4-205	ENSSSCT00055019989	1628	402aa	ENSSSCP00055015773
ELAVL4-206	ENSSSCT00055020042	1805	380aa	ENSSSCP00055015812
ELAVL4-207	ENSSSCT00055020066	1698	359aa	ENSSSCP00055015833
ELAVL4-208	ENSSSCT00055020112	1523	367aa	ENSSSCP00055015870

Gene Model

Click here to download ENSSSCG00055010041's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00055010041's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055034472	10.9118	7.02541	sus_scrofa_pietrain	ENSSSCP00055015773	18.1592	11.6915
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055046935	87.1935	81.7439	sus_scrofa_pietrain	ENSSSCP00055015773	79.602	74.6269
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055012071	18.4322	10.3814	sus_scrofa_pietrain	ENSSSCP00055015773	21.6418	12.1891
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055032036	20.7987	10.9817	sus_scrofa_pietrain	ENSSSCP00055015773	31.0945	16.4179
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055034001	19.1153	9.47867	sus_scrofa_pietrain	ENSSSCP00055015773	30.0995	14.9254
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055047960	14.6508	6.98467	sus_scrofa_pietrain	ENSSSCP00055015773	21.393	10.199
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055046663	21.1302	13.2678	sus_scrofa_pietrain	ENSSSCP00055015773	21.393	13.4328
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055014222	40.6015	19.5489	sus_scrofa_pietrain	ENSSSCP00055015773	40.2985	19.403
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055019479	84.9693	73.3129	sus_scrofa_pietrain	ENSSSCP00055015773	68.9055	59.4527
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055019234	20.1357	12.2172	sus_scrofa_pietrain	ENSSSCP00055015773	22.1393	13.4328
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055046366	21.6981	12.0283	sus_scrofa_pietrain	ENSSSCP00055015773	22.8856	12.6866
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055035066	4.46927	3.35196	sus_scrofa_pietrain	ENSSSCP00055015773	1.99005	1.49254
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055014835	33.1081	16.8919	sus_scrofa_pietrain	ENSSSCP00055015773	12.1891	6.21891
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055002625	22.4751	12.3755	sus_scrofa_pietrain	ENSSSCP00055015773	39.3035	21.6418
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055010143	20.1774	11.7517	sus_scrofa_pietrain	ENSSSCP00055015773	22.6368	13.1841
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055016113	89.4057	83.9793	sus_scrofa_pietrain	ENSSSCP00055015773	86.0696	80.8458
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055023354	37.9581	20.1571	sus_scrofa_pietrain	ENSSSCP00055015773	36.0697	19.1542
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055014558	24.918	13.9344	sus_scrofa_pietrain	ENSSSCP00055015773	37.8109	21.1443
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055005680	16.0338	10.5485	sus_scrofa_pietrain	ENSSSCP00055015773	18.9055	12.4378
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055013832	17.5732	12.5523	sus_scrofa_pietrain	ENSSSCP00055015773	10.4478	7.46269
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055002699	15.9794	6.70103	sus_scrofa_pietrain	ENSSSCP00055015773	15.4229	6.46766
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055022231	19.5652	10.3865	sus_scrofa_pietrain	ENSSSCP00055015773	20.1493	10.6965
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055000681	20	12.6437	sus_scrofa_pietrain	ENSSSCP00055015773	21.6418	13.6816
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055041531	24.1327	12.368	sus_scrofa_pietrain	ENSSSCP00055015773	39.801	20.398

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055015773	95.0249	92.7861	sus_scrofa_largewhite	ENSSSCP00025025521	78.4394	76.5914
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055015773	100	100	sus_scrofa	ENSSSCP00000072919	100	100
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055015773	100	99.7512	equus_caballus	ENSECAP00000051328	100	99.7512
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055015773	95.0249	92.7861	sus_scrofa_berkshire	ENSSSCP00065013755	78.4394	76.5914
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055015773	95.0249	92.2886	sus_scrofa_tibetan	ENSSSCP00015009531	79.9163	77.6151
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055015773	100	100	sus_scrofa_usmarc	ENSSSCP00070051469	100	100
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055015773	91.0448	91.0448	bos_taurus	ENSBTAP00000068965	98.6523	98.6523
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055015773	95.0249	92.2886	sus_scrofa_wuzhishan	ENSSSCP00005017117	82.3276	79.9569
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055015773	95.0249	92.2886	sus_scrofa_meishan	ENSSSCP00040043371	82.3276	79.9569
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055015773	95.0249	92.2886	sus_scrofa_bamei	ENSSSCP00050016799	82.3276	79.9569
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055015773	27.1144	26.8657	sus_scrofa_bamei	ENSSSCP00050019784	99.0909	98.1818
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055015773	95.0249	92.2886	sus_scrofa_jinhua	ENSSSCP00060044945	82.3276	79.9569
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055015773	91.791	89.5522	sus_scrofa_landrace	ENSSSCP00045010087	77.8481	75.9494
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055015773	95.0249	92.7861	sus_scrofa_hampshire	ENSSSCP00035025269	78.4394	76.5914
ENSSSCG00055010041	sus_scrofa_pietrain	ENSSSCP00055015773	100	100	sus_scrofa_rongchang	ENSSSCP00030025924	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression