RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00055009314 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
82187 bases |
Strand |
Minus strand |
Position |
LUXU01049728.1 : 1101954 - 1184140 |
RNA binding domain |
RRM_5 , RRM_8 , RRM_1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00055015021 |
RRM_5 |
PF13893 |
4.2e-45 |
1 |
ENSSSCP00055015021 |
RRM_5 |
PF13893 |
4.2e-45 |
2 |
ENSSSCP00055015021 |
RRM_5 |
PF13893 |
4.2e-45 |
3 |
ENSSSCP00055015021 |
RRM_8 |
PF11835 |
2e-14 |
4 |
ENSSSCP00055015021 |
RRM_1 |
PF00076 |
4.9e-26 |
5 |
ENSSSCP00055015021 |
RRM_1 |
PF00076 |
4.9e-26 |
6 |
ENSSSCP00055015290 |
RRM_5 |
PF13893 |
2.9e-44 |
1 |
ENSSSCP00055015290 |
RRM_5 |
PF13893 |
2.9e-44 |
2 |
ENSSSCP00055015290 |
RRM_5 |
PF13893 |
2.9e-44 |
3 |
ENSSSCP00055015290 |
RRM_8 |
PF11835 |
1.1e-14 |
4 |
ENSSSCP00055015290 |
RRM_1 |
PF00076 |
4.3e-23 |
5 |
ENSSSCP00055015290 |
RRM_1 |
PF00076 |
4.3e-23 |
6 |
ENSSSCP00055015241 |
RRM_5 |
PF13893 |
1.6e-30 |
1 |
ENSSSCP00055015241 |
RRM_5 |
PF13893 |
1.6e-30 |
2 |
ENSSSCP00055015241 |
RRM_5 |
PF13893 |
1.6e-30 |
3 |
ENSSSCP00055015241 |
RRM_8 |
PF11835 |
2e-14 |
4 |
ENSSSCP00055015241 |
RRM_1 |
PF00076 |
2.6e-19 |
5 |
ENSSSCP00055015191 |
RRM_5 |
PF13893 |
3.4e-30 |
1 |
ENSSSCP00055015191 |
RRM_5 |
PF13893 |
3.4e-30 |
2 |
ENSSSCP00055015191 |
RRM_5 |
PF13893 |
3.4e-30 |
3 |
ENSSSCP00055015191 |
RRM_8 |
PF11835 |
2.1e-14 |
4 |
ENSSSCP00055015191 |
RRM_1 |
PF00076 |
3.1e-19 |
5 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00055019046 |
1671 |
556aa |
ENSSSCP00055015021 |
- |
ENSSSCT00055019269 |
1563 |
520aa |
ENSSSCP00055015191 |
- |
ENSSSCT00055019327 |
1518 |
505aa |
ENSSSCP00055015241 |
- |
ENSSSCT00055019385 |
1287 |
428aa |
ENSSSCP00055015290 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00055009314 | sus_scrofa_pietrain | ENSSSCP00055002701 | 77.2812 | 61.825 | sus_scrofa_pietrain | ENSSSCP00055015021 | 74.6403 | 59.7122 |
ENSSSCG00055009314 | sus_scrofa_pietrain | ENSSSCP00055042888 | 35.4949 | 19.2833 | sus_scrofa_pietrain | ENSSSCP00055015021 | 37.4101 | 20.3237 |
ENSSSCG00055009314 | sus_scrofa_pietrain | ENSSSCP00055000169 | 36.7459 | 19.9269 | sus_scrofa_pietrain | ENSSSCP00055015021 | 36.1511 | 19.6043 |
ENSSSCG00055009314 | sus_scrofa_pietrain | ENSSSCP00055037216 | 67.5425 | 57.8053 | sus_scrofa_pietrain | ENSSSCP00055015021 | 78.5971 | 67.2662 |
ENSSSCG00055009314 | sus_scrofa_pietrain | ENSSSCP00055015929 | 15.5356 | 7.68602 | sus_scrofa_pietrain | ENSSSCP00055015021 | 34.1727 | 16.9065 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00055009314 | sus_scrofa_pietrain | ENSSSCP00055015021 | 92.8058 | 89.5683 | sus_scrofa_largewhite | ENSSSCP00025035193 | 92.6391 | 89.4075 |
ENSSSCG00055009314 | sus_scrofa_pietrain | ENSSSCP00055015021 | 92.8058 | 89.5683 | sus_scrofa | ENSSSCP00000005863 | 92.6391 | 89.4075 |
ENSSSCG00055009314 | sus_scrofa_pietrain | ENSSSCP00055015021 | 85.6115 | 80.7554 | equus_caballus | ENSECAP00000042243 | 59.5745 | 56.1952 |
ENSSSCG00055009314 | sus_scrofa_pietrain | ENSSSCP00055015021 | 92.8058 | 89.5683 | sus_scrofa_berkshire | ENSSSCP00065018776 | 92.6391 | 89.4075 |
ENSSSCG00055009314 | sus_scrofa_pietrain | ENSSSCP00055015021 | 92.8058 | 89.5683 | sus_scrofa_tibetan | ENSSSCP00015013438 | 92.6391 | 89.4075 |
ENSSSCG00055009314 | sus_scrofa_pietrain | ENSSSCP00055015021 | 92.8058 | 89.5683 | sus_scrofa_usmarc | ENSSSCP00070036873 | 92.6391 | 89.4075 |
ENSSSCG00055009314 | sus_scrofa_pietrain | ENSSSCP00055015021 | 89.2086 | 83.4532 | ovis_aries_rambouillet | ENSOARP00020028335 | 58.1477 | 54.3962 |
ENSSSCG00055009314 | sus_scrofa_pietrain | ENSSSCP00055015021 | 91.9065 | 87.5899 | bos_taurus | ENSBTAP00000057353 | 91.9065 | 87.5899 |
ENSSSCG00055009314 | sus_scrofa_pietrain | ENSSSCP00055015021 | 89.2086 | 86.3309 | sus_scrofa_wuzhishan | ENSSSCP00005024839 | 93.0582 | 90.0563 |
ENSSSCG00055009314 | sus_scrofa_pietrain | ENSSSCP00055015021 | 92.8058 | 89.5683 | sus_scrofa_meishan | ENSSSCP00040032330 | 92.6391 | 89.4075 |
ENSSSCG00055009314 | sus_scrofa_pietrain | ENSSSCP00055015021 | 92.8058 | 89.5683 | sus_scrofa_bamei | ENSSSCP00050043341 | 92.6391 | 89.4075 |
ENSSSCG00055009314 | sus_scrofa_pietrain | ENSSSCP00055015021 | 92.8058 | 89.5683 | sus_scrofa_jinhua | ENSSSCP00060032869 | 92.6391 | 89.4075 |
ENSSSCG00055009314 | sus_scrofa_pietrain | ENSSSCP00055015021 | 92.8058 | 89.5683 | sus_scrofa_landrace | ENSSSCP00045040896 | 92.6391 | 89.4075 |
ENSSSCG00055009314 | sus_scrofa_pietrain | ENSSSCP00055015021 | 92.8058 | 89.5683 | sus_scrofa_hampshire | ENSSSCP00035011580 | 92.6391 | 89.4075 |
ENSSSCG00055009314 | sus_scrofa_pietrain | ENSSSCP00055015021 | 92.8058 | 89.5683 | sus_scrofa_rongchang | ENSSSCP00030009693 | 92.6391 | 89.4075 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |