RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00055009260 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
4463 bases |
Strand |
Minus strand |
Position |
LUXU01018120.1 : 10539 - 15001 |
RNA binding domain |
RRM_5 , RRM_1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00055014222 |
RRM_5 |
PF13893 |
3.8e-13 |
1 |
ENSSSCP00055014222 |
RRM_5 |
PF13893 |
3.8e-13 |
2 |
ENSSSCP00055014222 |
RRM_5 |
PF13893 |
3.8e-13 |
3 |
ENSSSCP00055014222 |
RRM_1 |
PF00076 |
1.6e-83 |
4 |
ENSSSCP00055014222 |
RRM_1 |
PF00076 |
1.6e-83 |
5 |
ENSSSCP00055014222 |
RRM_1 |
PF00076 |
1.6e-83 |
6 |
ENSSSCP00055014222 |
RRM_1 |
PF00076 |
1.6e-83 |
7 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00055018060 |
4463 |
399aa |
ENSSSCP00055014222 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055034472 | 11.5097 | 4.63378 | sus_scrofa_pietrain | ENSSSCP00055014222 | 19.2982 | 7.76942 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055046935 | 42.7793 | 21.5259 | sus_scrofa_pietrain | ENSSSCP00055014222 | 39.3484 | 19.7995 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055012071 | 18.0085 | 8.47458 | sus_scrofa_pietrain | ENSSSCP00055014222 | 21.3033 | 10.0251 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055032036 | 21.1314 | 11.6473 | sus_scrofa_pietrain | ENSSSCP00055014222 | 31.8296 | 17.5439 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055034001 | 20.3791 | 10.2686 | sus_scrofa_pietrain | ENSSSCP00055014222 | 32.3308 | 16.2907 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055047960 | 17.0358 | 9.02896 | sus_scrofa_pietrain | ENSSSCP00055014222 | 25.0627 | 13.2832 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055046663 | 19.656 | 10.8108 | sus_scrofa_pietrain | ENSSSCP00055014222 | 20.0501 | 11.0276 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055019479 | 48.773 | 26.3804 | sus_scrofa_pietrain | ENSSSCP00055014222 | 39.8496 | 21.5539 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055019234 | 18.0995 | 9.72851 | sus_scrofa_pietrain | ENSSSCP00055014222 | 20.0501 | 10.7769 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055046366 | 23.8208 | 14.6226 | sus_scrofa_pietrain | ENSSSCP00055014222 | 25.3133 | 15.5388 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055035066 | 6.70391 | 3.91061 | sus_scrofa_pietrain | ENSSSCP00055014222 | 3.00752 | 1.75439 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055014835 | 42.5676 | 31.7568 | sus_scrofa_pietrain | ENSSSCP00055014222 | 15.7895 | 11.7794 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055002625 | 46.2304 | 38.1223 | sus_scrofa_pietrain | ENSSSCP00055014222 | 81.4536 | 67.1679 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055010143 | 36.5854 | 28.1596 | sus_scrofa_pietrain | ENSSSCP00055014222 | 41.3534 | 31.8296 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055016113 | 42.1189 | 20.155 | sus_scrofa_pietrain | ENSSSCP00055014222 | 40.8521 | 19.5489 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055023354 | 76.9633 | 60.733 | sus_scrofa_pietrain | ENSSSCP00055014222 | 73.6842 | 58.1454 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055014558 | 50 | 39.6721 | sus_scrofa_pietrain | ENSSSCP00055014222 | 76.4411 | 60.6516 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055005680 | 17.5105 | 8.22785 | sus_scrofa_pietrain | ENSSSCP00055014222 | 20.802 | 9.77444 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055013832 | 19.2469 | 10.8787 | sus_scrofa_pietrain | ENSSSCP00055014222 | 11.5288 | 6.51629 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055002699 | 14.6907 | 5.92783 | sus_scrofa_pietrain | ENSSSCP00055014222 | 14.2857 | 5.76441 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055022231 | 18.8406 | 7.97101 | sus_scrofa_pietrain | ENSSSCP00055014222 | 19.5489 | 8.27068 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055000681 | 18.6207 | 10.3448 | sus_scrofa_pietrain | ENSSSCP00055014222 | 20.3008 | 11.2782 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055041531 | 49.3213 | 42.2323 | sus_scrofa_pietrain | ENSSSCP00055014222 | 81.9549 | 70.1754 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055015773 | 40.2985 | 19.403 | sus_scrofa_pietrain | ENSSSCP00055014222 | 40.6015 | 19.5489 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055014222 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025013558 | 100 | 100 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055014222 | 85.4637 | 85.4637 | sus_scrofa | ENSSSCP00000057118 | 100 | 100 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055014222 | 91.7293 | 88.2206 | equus_caballus | ENSECAP00000025263 | 98.9189 | 95.1351 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055014222 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065027360 | 100 | 100 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055014222 | 100 | 100 | sus_scrofa_tibetan | ENSSSCP00015000799 | 100 | 100 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055014222 | 94.4862 | 94.4862 | sus_scrofa_usmarc | ENSSSCP00070040429 | 94.9622 | 94.9622 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055014222 | 90.7268 | 89.2231 | ovis_aries_rambouillet | ENSOARP00020020802 | 97.8378 | 96.2162 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055014222 | 90.9774 | 89.7243 | bos_taurus | ENSBTAP00000060539 | 98.1081 | 96.7568 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055014222 | 100 | 100 | sus_scrofa_wuzhishan | ENSSSCP00005020257 | 100 | 100 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055014222 | 100 | 100 | sus_scrofa_meishan | ENSSSCP00040032317 | 100 | 100 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055014222 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050033431 | 100 | 100 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055014222 | 100 | 100 | sus_scrofa_jinhua | ENSSSCP00060021659 | 100 | 100 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055014222 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045019523 | 100 | 100 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055014222 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035025809 | 100 | 100 |
ENSSSCG00055009260 | sus_scrofa_pietrain | ENSSSCP00055014222 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030045618 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |