Description

Ensembl ID ENSSSCG00055009260 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 4463 bases Strand Minus strand
Position LUXU01018120.1 : 10539 - 15001 RNA binding domain RRM_5 , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00055014222 RRM_5 PF13893 3.8e-13 1
ENSSSCP00055014222 RRM_5 PF13893 3.8e-13 2
ENSSSCP00055014222 RRM_5 PF13893 3.8e-13 3
ENSSSCP00055014222 RRM_1 PF00076 1.6e-83 4
ENSSSCP00055014222 RRM_1 PF00076 1.6e-83 5
ENSSSCP00055014222 RRM_1 PF00076 1.6e-83 6
ENSSSCP00055014222 RRM_1 PF00076 1.6e-83 7

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00055018060 4463 399aa ENSSSCP00055014222

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005503447211.50974.63378sus_scrofa_pietrainENSSSCP0005501422219.29827.76942
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005504693542.779321.5259sus_scrofa_pietrainENSSSCP0005501422239.348419.7995
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005501207118.00858.47458sus_scrofa_pietrainENSSSCP0005501422221.303310.0251
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005503203621.131411.6473sus_scrofa_pietrainENSSSCP0005501422231.829617.5439
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005503400120.379110.2686sus_scrofa_pietrainENSSSCP0005501422232.330816.2907
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005504796017.03589.02896sus_scrofa_pietrainENSSSCP0005501422225.062713.2832
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005504666319.65610.8108sus_scrofa_pietrainENSSSCP0005501422220.050111.0276
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005501947948.77326.3804sus_scrofa_pietrainENSSSCP0005501422239.849621.5539
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005501923418.09959.72851sus_scrofa_pietrainENSSSCP0005501422220.050110.7769
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005504636623.820814.6226sus_scrofa_pietrainENSSSCP0005501422225.313315.5388
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP000550350666.703913.91061sus_scrofa_pietrainENSSSCP000550142223.007521.75439
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005501483542.567631.7568sus_scrofa_pietrainENSSSCP0005501422215.789511.7794
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005500262546.230438.1223sus_scrofa_pietrainENSSSCP0005501422281.453667.1679
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005501014336.585428.1596sus_scrofa_pietrainENSSSCP0005501422241.353431.8296
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005501611342.118920.155sus_scrofa_pietrainENSSSCP0005501422240.852119.5489
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005502335476.963360.733sus_scrofa_pietrainENSSSCP0005501422273.684258.1454
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP000550145585039.6721sus_scrofa_pietrainENSSSCP0005501422276.441160.6516
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005500568017.51058.22785sus_scrofa_pietrainENSSSCP0005501422220.8029.77444
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005501383219.246910.8787sus_scrofa_pietrainENSSSCP0005501422211.52886.51629
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005500269914.69075.92783sus_scrofa_pietrainENSSSCP0005501422214.28575.76441
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005502223118.84067.97101sus_scrofa_pietrainENSSSCP0005501422219.54898.27068
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005500068118.620710.3448sus_scrofa_pietrainENSSSCP0005501422220.300811.2782
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005504153149.321342.2323sus_scrofa_pietrainENSSSCP0005501422281.954970.1754
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005501577340.298519.403sus_scrofa_pietrainENSSSCP0005501422240.601519.5489

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP00055014222100100sus_scrofa_largewhiteENSSSCP00025013558100100
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005501422285.463785.4637sus_scrofaENSSSCP00000057118100100
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005501422291.729388.2206equus_caballusENSECAP0000002526398.918995.1351
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP00055014222100100sus_scrofa_berkshireENSSSCP00065027360100100
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP00055014222100100sus_scrofa_tibetanENSSSCP00015000799100100
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005501422294.486294.4862sus_scrofa_usmarcENSSSCP0007004042994.962294.9622
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005501422290.726889.2231ovis_aries_rambouilletENSOARP0002002080297.837896.2162
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP0005501422290.977489.7243bos_taurusENSBTAP0000006053998.108196.7568
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP00055014222100100sus_scrofa_wuzhishanENSSSCP00005020257100100
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP00055014222100100sus_scrofa_meishanENSSSCP00040032317100100
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP00055014222100100sus_scrofa_bameiENSSSCP00050033431100100
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP00055014222100100sus_scrofa_jinhuaENSSSCP00060021659100100
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP00055014222100100sus_scrofa_landraceENSSSCP00045019523100100
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP00055014222100100sus_scrofa_hampshireENSSSCP00035025809100100
ENSSSCG00055009260sus_scrofa_pietrainENSSSCP00055014222100100sus_scrofa_rongchangENSSSCP00030045618100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression