RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00055008721 | Gene ID |
100157107 |
Accession |
- |
Symbol |
SCNM1 |
Alias |
- |
Full Name |
sodium channel modifier 1 |
Status |
Confidence |
Length |
2507 bases |
Strand |
Plus strand |
Position |
LUXU01011655.1 : 216078 - 218584 |
RNA binding domain |
zf-SCNM1 , SCNM1_acidic |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00055013452 |
zf-SCNM1 |
PF15803 |
7.7e-15 |
1 |
ENSSSCP00055013452 |
SCNM1_acidic |
PF15805 |
8.5e-26 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
SCNM1-201 |
ENSSSCT00055017037 |
880 |
230aa |
ENSSSCP00055013452 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00055008721 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00055008721 | sus_scrofa_pietrain | ENSSSCP00055013452 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025039219 | 100 | 100 |
ENSSSCG00055008721 | sus_scrofa_pietrain | ENSSSCP00055013452 | 100 | 100 | sus_scrofa | ENSSSCP00000007073 | 100 | 100 |
ENSSSCG00055008721 | sus_scrofa_pietrain | ENSSSCP00055013452 | 91.7391 | 89.1304 | equus_caballus | ENSECAP00000085394 | 91.7391 | 89.1304 |
ENSSSCG00055008721 | sus_scrofa_pietrain | ENSSSCP00055013452 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065035363 | 100 | 100 |
ENSSSCG00055008721 | sus_scrofa_pietrain | ENSSSCP00055013452 | 100 | 99.5652 | sus_scrofa_tibetan | ENSSSCP00015002546 | 100 | 99.5652 |
ENSSSCG00055008721 | sus_scrofa_pietrain | ENSSSCP00055013452 | 100 | 100 | sus_scrofa_usmarc | ENSSSCP00070047854 | 100 | 100 |
ENSSSCG00055008721 | sus_scrofa_pietrain | ENSSSCP00055013452 | 91.7391 | 90.4348 | ovis_aries_rambouillet | ENSOARP00020017045 | 91.7391 | 90.4348 |
ENSSSCG00055008721 | sus_scrofa_pietrain | ENSSSCP00055013452 | 93.0435 | 92.1739 | bos_taurus | ENSBTAP00000024057 | 93.0435 | 92.1739 |
ENSSSCG00055008721 | sus_scrofa_pietrain | ENSSSCP00055013452 | 94.3478 | 94.3478 | sus_scrofa_wuzhishan | ENSSSCP00005022051 | 100 | 100 |
ENSSSCG00055008721 | sus_scrofa_pietrain | ENSSSCP00055013452 | 100 | 100 | sus_scrofa_meishan | ENSSSCP00040047910 | 100 | 100 |
ENSSSCG00055008721 | sus_scrofa_pietrain | ENSSSCP00055013452 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050027499 | 100 | 100 |
ENSSSCG00055008721 | sus_scrofa_pietrain | ENSSSCP00055013452 | 100 | 100 | sus_scrofa_jinhua | ENSSSCP00060004420 | 100 | 100 |
ENSSSCG00055008721 | sus_scrofa_pietrain | ENSSSCP00055013452 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045026699 | 100 | 100 |
ENSSSCG00055008721 | sus_scrofa_pietrain | ENSSSCP00055013452 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035035265 | 100 | 100 |
ENSSSCG00055008721 | sus_scrofa_pietrain | ENSSSCP00055013452 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030038547 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |