Description

Ensembl ID ENSSSCG00055008721 Gene ID 100157107 Accession -
Symbol SCNM1 Alias - Full Name sodium channel modifier 1
Status Confidence Length 2507 bases Strand Plus strand
Position LUXU01011655.1 : 216078 - 218584 RNA binding domain zf-SCNM1 , SCNM1_acidic
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00055013452 zf-SCNM1 PF15803 7.7e-15 1
ENSSSCP00055013452 SCNM1_acidic PF15805 8.5e-26 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
SCNM1-201 ENSSSCT00055017037 880 230aa ENSSSCP00055013452

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00055008721

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00055008721sus_scrofa_pietrainENSSSCP00055013452100100sus_scrofa_largewhiteENSSSCP00025039219100100
ENSSSCG00055008721sus_scrofa_pietrainENSSSCP00055013452100100sus_scrofaENSSSCP00000007073100100
ENSSSCG00055008721sus_scrofa_pietrainENSSSCP0005501345291.739189.1304equus_caballusENSECAP0000008539491.739189.1304
ENSSSCG00055008721sus_scrofa_pietrainENSSSCP00055013452100100sus_scrofa_berkshireENSSSCP00065035363100100
ENSSSCG00055008721sus_scrofa_pietrainENSSSCP0005501345210099.5652sus_scrofa_tibetanENSSSCP0001500254610099.5652
ENSSSCG00055008721sus_scrofa_pietrainENSSSCP00055013452100100sus_scrofa_usmarcENSSSCP00070047854100100
ENSSSCG00055008721sus_scrofa_pietrainENSSSCP0005501345291.739190.4348ovis_aries_rambouilletENSOARP0002001704591.739190.4348
ENSSSCG00055008721sus_scrofa_pietrainENSSSCP0005501345293.043592.1739bos_taurusENSBTAP0000002405793.043592.1739
ENSSSCG00055008721sus_scrofa_pietrainENSSSCP0005501345294.347894.3478sus_scrofa_wuzhishanENSSSCP00005022051100100
ENSSSCG00055008721sus_scrofa_pietrainENSSSCP00055013452100100sus_scrofa_meishanENSSSCP00040047910100100
ENSSSCG00055008721sus_scrofa_pietrainENSSSCP00055013452100100sus_scrofa_bameiENSSSCP00050027499100100
ENSSSCG00055008721sus_scrofa_pietrainENSSSCP00055013452100100sus_scrofa_jinhuaENSSSCP00060004420100100
ENSSSCG00055008721sus_scrofa_pietrainENSSSCP00055013452100100sus_scrofa_landraceENSSSCP00045026699100100
ENSSSCG00055008721sus_scrofa_pietrainENSSSCP00055013452100100sus_scrofa_hampshireENSSSCP00035035265100100
ENSSSCG00055008721sus_scrofa_pietrainENSSSCP00055013452100100sus_scrofa_rongchangENSSSCP00030038547100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression