Description

Ensembl ID ENSSSCG00055007371 Gene ID 100525306 Accession -
Symbol MBNL1 Alias - Full Name muscleblind like splicing regulator 1
Status Confidence Length 204148 bases Strand Plus strand
Position LUXU01040323.1 : 831512 - 1035659 RNA binding domain zf-CCCH , zf-CCCH_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00055011419 zf-CCCH PF00642 2.7e-10 1
ENSSSCP00055011444 zf-CCCH PF00642 3.2e-10 1
ENSSSCP00055011444 zf-CCCH_2 PF14608 4.1e-06 2
ENSSSCP00055011444 zf-CCCH_2 PF14608 4.1e-06 3
ENSSSCP00055011444 zf-CCCH_2 PF14608 4.1e-06 4
ENSSSCP00055011468 zf-CCCH PF00642 3.6e-10 1
ENSSSCP00055011468 zf-CCCH_2 PF14608 4.6e-06 2
ENSSSCP00055011468 zf-CCCH_2 PF14608 4.6e-06 3
ENSSSCP00055011468 zf-CCCH_2 PF14608 4.6e-06 4
ENSSSCP00055011391 zf-CCCH PF00642 6.8e-10 1
ENSSSCP00055011391 zf-CCCH_2 PF14608 9.8e-06 2
ENSSSCP00055011391 zf-CCCH_2 PF14608 9.8e-06 3
ENSSSCP00055011391 zf-CCCH_2 PF14608 9.8e-06 4
ENSSSCP00055011626 zf-CCCH PF00642 4.6e-09 1
ENSSSCP00055011626 zf-CCCH_2 PF14608 8.6e-06 2
ENSSSCP00055011626 zf-CCCH_2 PF14608 8.6e-06 3
ENSSSCP00055011626 zf-CCCH_2 PF14608 8.6e-06 4
ENSSSCP00055011500 zf-CCCH PF00642 5.9e-09 1
ENSSSCP00055011500 zf-CCCH_2 PF14608 1e-05 2
ENSSSCP00055011500 zf-CCCH_2 PF14608 1e-05 3
ENSSSCP00055011500 zf-CCCH_2 PF14608 1e-05 4
ENSSSCP00055011578 zf-CCCH PF00642 6.1e-09 1
ENSSSCP00055011578 zf-CCCH_2 PF14608 1.1e-05 2
ENSSSCP00055011578 zf-CCCH_2 PF14608 1.1e-05 3
ENSSSCP00055011578 zf-CCCH_2 PF14608 1.1e-05 4
ENSSSCP00055011543 zf-CCCH PF00642 7e-09 1
ENSSSCP00055011543 zf-CCCH_2 PF14608 1.2e-05 2
ENSSSCP00055011543 zf-CCCH_2 PF14608 1.2e-05 3
ENSSSCP00055011543 zf-CCCH_2 PF14608 1.2e-05 4
ENSSSCP00055011689 zf-CCCH PF00642 1.8e-07 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
MBNL1-205 ENSSSCT00055014483 5732 399aa ENSSSCP00055011391
MBNL1-204 ENSSSCT00055014515 2128 339aa ENSSSCP00055011419
MBNL1-203 ENSSSCT00055014556 2157 341aa ENSSSCP00055011444
MBNL1-202 ENSSSCT00055014583 2152 347aa ENSSSCP00055011468
MBNL1-201 ENSSSCT00055014622 2374 421aa ENSSSCP00055011500
MBNL1-206 ENSSSCT00055014673 5752 436aa ENSSSCP00055011543
MBNL1-207 ENSSSCT00055014718 5716 424aa ENSSSCP00055011578
MBNL1-208 ENSSSCT00055014780 5659 406aa ENSSSCP00055011626
MBNL1-209 ENSSSCT00055014854 2035 399aa ENSSSCP00055011689

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00055007371sus_scrofa_pietrainENSSSCP0005502300377.493668.2864sus_scrofa_pietrainENSSSCP0005501154369.495461.2385
ENSSSCG00055007371sus_scrofa_pietrainENSSSCP0005500678079.132867.7507sus_scrofa_pietrainENSSSCP0005501154366.972557.3395
ENSSSCG00055007371sus_scrofa_pietrainENSSSCP0005501349026.206915.8621sus_scrofa_pietrainENSSSCP0005501154326.146815.8257

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00055007371sus_scrofa_pietrainENSSSCP0005501154395.871695.6422sus_scrofa_largewhiteENSSSCP0002501398910099.7608
ENSSSCG00055007371sus_scrofa_pietrainENSSSCP0005501154391.513891.5138sus_scrofaENSSSCP00000043321100100
ENSSSCG00055007371sus_scrofa_pietrainENSSSCP0005501154383.486283.2569equus_caballusENSECAP0000002191998.378498.1081
ENSSSCG00055007371sus_scrofa_pietrainENSSSCP0005501154378.21178.211sus_scrofa_berkshireENSSSCP00065025880100100
ENSSSCG00055007371sus_scrofa_pietrainENSSSCP00055011543100100sus_scrofa_tibetanENSSSCP00015004133100100
ENSSSCG00055007371sus_scrofa_pietrainENSSSCP00055011543100100sus_scrofa_usmarcENSSSCP00070005974100100
ENSSSCG00055007371sus_scrofa_pietrainENSSSCP0005501154399.770699.5413ovis_aries_rambouilletENSOARP0002000429099.770699.5413
ENSSSCG00055007371sus_scrofa_pietrainENSSSCP0005501154399.770699.5413bos_taurusENSBTAP0000006944599.770699.5413
ENSSSCG00055007371sus_scrofa_pietrainENSSSCP00055011543100100sus_scrofa_wuzhishanENSSSCP00005025446100100
ENSSSCG00055007371sus_scrofa_pietrainENSSSCP00055011543100100sus_scrofa_meishanENSSSCP00040027470100100
ENSSSCG00055007371sus_scrofa_pietrainENSSSCP00055011543100100sus_scrofa_bameiENSSSCP00050010381100100
ENSSSCG00055007371sus_scrofa_pietrainENSSSCP00055011543100100sus_scrofa_jinhuaENSSSCP00060010785100100
ENSSSCG00055007371sus_scrofa_pietrainENSSSCP00055011543100100sus_scrofa_landraceENSSSCP00045032190100100
ENSSSCG00055007371sus_scrofa_pietrainENSSSCP00055011543100100sus_scrofa_hampshireENSSSCP00035004864100100
ENSSSCG00055007371sus_scrofa_pietrainENSSSCP00055011543100100sus_scrofa_rongchangENSSSCP00030039038100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression