RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00055006026 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
76340 bases |
Strand |
Minus strand |
Position |
LUXU01027473.1 : 416561 - 492900 |
RNA binding domain |
zf-CCCH , zf-CCCH_2 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00055009475 |
zf-CCCH |
PF00642 |
2.4e-11 |
1 |
ENSSSCP00055009475 |
zf-CCCH |
PF00642 |
2.4e-11 |
2 |
ENSSSCP00055009475 |
zf-CCCH_2 |
PF14608 |
2.6e-11 |
3 |
ENSSSCP00055009475 |
zf-CCCH_2 |
PF14608 |
2.6e-11 |
4 |
ENSSSCP00055009475 |
zf-CCCH_2 |
PF14608 |
2.6e-11 |
5 |
ENSSSCP00055009324 |
zf-CCCH |
PF00642 |
2.5e-11 |
1 |
ENSSSCP00055009324 |
zf-CCCH |
PF00642 |
2.5e-11 |
2 |
ENSSSCP00055009324 |
zf-CCCH_2 |
PF14608 |
2.7e-11 |
3 |
ENSSSCP00055009324 |
zf-CCCH_2 |
PF14608 |
2.7e-11 |
4 |
ENSSSCP00055009324 |
zf-CCCH_2 |
PF14608 |
2.7e-11 |
5 |
ENSSSCP00055009451 |
zf-CCCH |
PF00642 |
2.8e-11 |
1 |
ENSSSCP00055009451 |
zf-CCCH |
PF00642 |
2.8e-11 |
2 |
ENSSSCP00055009451 |
zf-CCCH_2 |
PF14608 |
3e-11 |
3 |
ENSSSCP00055009451 |
zf-CCCH_2 |
PF14608 |
3e-11 |
4 |
ENSSSCP00055009451 |
zf-CCCH_2 |
PF14608 |
3e-11 |
5 |
ENSSSCP00055009374 |
zf-CCCH |
PF00642 |
3e-11 |
1 |
ENSSSCP00055009374 |
zf-CCCH |
PF00642 |
3e-11 |
2 |
ENSSSCP00055009374 |
zf-CCCH_2 |
PF14608 |
3.3e-11 |
3 |
ENSSSCP00055009374 |
zf-CCCH_2 |
PF14608 |
3.3e-11 |
4 |
ENSSSCP00055009374 |
zf-CCCH_2 |
PF14608 |
3.3e-11 |
5 |
ENSSSCP00055009421 |
zf-CCCH |
PF00642 |
3e-11 |
1 |
ENSSSCP00055009421 |
zf-CCCH |
PF00642 |
3e-11 |
2 |
ENSSSCP00055009421 |
zf-CCCH_2 |
PF14608 |
3.3e-11 |
3 |
ENSSSCP00055009421 |
zf-CCCH_2 |
PF14608 |
3.3e-11 |
4 |
ENSSSCP00055009421 |
zf-CCCH_2 |
PF14608 |
3.3e-11 |
5 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00055011789 |
5128 |
1122aa |
ENSSSCP00055009324 |
- |
ENSSSCT00055011854 |
6092 |
1181aa |
ENSSSCP00055009374 |
- |
ENSSSCT00055011921 |
5314 |
1183aa |
ENSSSCP00055009421 |
- |
ENSSSCT00055011963 |
3571 |
1153aa |
ENSSSCP00055009451 |
- |
ENSSSCT00055011994 |
4694 |
1105aa |
ENSSSCP00055009475 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00055006026 | sus_scrofa_pietrain | ENSSSCP00055009579 | 64.4013 | 45.9547 | sus_scrofa_pietrain | ENSSSCP00055009421 | 16.8216 | 12.0034 |
ENSSSCG00055006026 | sus_scrofa_pietrain | ENSSSCP00055009305 | 39.8794 | 28.5099 | sus_scrofa_pietrain | ENSSSCP00055009421 | 39.1378 | 27.9797 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00055006026 | sus_scrofa_pietrain | ENSSSCP00055009421 | 96.9569 | 96.9569 | sus_scrofa_largewhite | ENSSSCP00025001960 | 99.9129 | 99.9129 |
ENSSSCG00055006026 | sus_scrofa_pietrain | ENSSSCP00055009421 | 99.9155 | 99.9155 | sus_scrofa | ENSSSCP00000048583 | 99.9155 | 99.9155 |
ENSSSCG00055006026 | sus_scrofa_pietrain | ENSSSCP00055009421 | 92.6458 | 89.8563 | equus_caballus | ENSECAP00000080408 | 91.2573 | 88.5096 |
ENSSSCG00055006026 | sus_scrofa_pietrain | ENSSSCP00055009421 | 96.9569 | 96.9569 | sus_scrofa_berkshire | ENSSSCP00065037093 | 99.9129 | 99.9129 |
ENSSSCG00055006026 | sus_scrofa_pietrain | ENSSSCP00055009421 | 90.279 | 89.5182 | sus_scrofa_tibetan | ENSSSCP00015035717 | 96.1296 | 95.3195 |
ENSSSCG00055006026 | sus_scrofa_pietrain | ENSSSCP00055009421 | 99.9155 | 99.9155 | sus_scrofa_usmarc | ENSSSCP00070038840 | 99.9155 | 99.9155 |
ENSSSCG00055006026 | sus_scrofa_pietrain | ENSSSCP00055009421 | 90.5325 | 86.3905 | ovis_aries_rambouillet | ENSOARP00020002524 | 91.5385 | 87.3504 |
ENSSSCG00055006026 | sus_scrofa_pietrain | ENSSSCP00055009421 | 16.6526 | 15.8918 | bos_taurus | ENSBTAP00000027514 | 96.5686 | 92.1569 |
ENSSSCG00055006026 | sus_scrofa_pietrain | ENSSSCP00055009421 | 98.9011 | 98.9011 | sus_scrofa_wuzhishan | ENSSSCP00005022331 | 98.9011 | 98.9011 |
ENSSSCG00055006026 | sus_scrofa_pietrain | ENSSSCP00055009421 | 99.8309 | 99.8309 | sus_scrofa_meishan | ENSSSCP00040034383 | 99.8309 | 99.8309 |
ENSSSCG00055006026 | sus_scrofa_pietrain | ENSSSCP00055009421 | 96.8724 | 96.8724 | sus_scrofa_bamei | ENSSSCP00050046107 | 99.8258 | 99.8258 |
ENSSSCG00055006026 | sus_scrofa_pietrain | ENSSSCP00055009421 | 96.8724 | 96.8724 | sus_scrofa_jinhua | ENSSSCP00060033911 | 99.8258 | 99.8258 |
ENSSSCG00055006026 | sus_scrofa_pietrain | ENSSSCP00055009421 | 96.9569 | 96.9569 | sus_scrofa_landrace | ENSSSCP00045023085 | 99.9129 | 99.9129 |
ENSSSCG00055006026 | sus_scrofa_pietrain | ENSSSCP00055009421 | 99.9155 | 99.9155 | sus_scrofa_hampshire | ENSSSCP00035012651 | 99.9155 | 99.9155 |
ENSSSCG00055006026 | sus_scrofa_pietrain | ENSSSCP00055009421 | 99.8309 | 99.8309 | sus_scrofa_rongchang | ENSSSCP00030040543 | 99.8309 | 99.8309 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |