RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00055005885	Gene ID		Accession	-
Symbol	TENT5D	Alias	-	Full Name	NA
Status	Confidence	Length	1173 bases	Strand	Minus strand
Position	LUXU01002342.1 : 370351 - 371523	RNA binding domain	NTP_transf_7
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00055009063	NTP_transf_7	PF07984	5.3e-159	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
TENT5D-201	ENSSSCT00055011460	1173	390aa	ENSSSCP00055009063

Gene Model

Click here to download ENSSSCG00055005885's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00055005885's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00055005885	sus_scrofa_pietrain	ENSSSCP00055004432	68.894	55.9908	sus_scrofa_pietrain	ENSSSCP00055009063	76.6667	62.3077
ENSSSCG00055005885	sus_scrofa_pietrain	ENSSSCP00055002881	77.2379	62.4041	sus_scrofa_pietrain	ENSSSCP00055009063	77.4359	62.5641
ENSSSCG00055005885	sus_scrofa_pietrain	ENSSSCP00055023642	62.3832	48.1308	sus_scrofa_pietrain	ENSSSCP00055009063	68.4615	52.8205

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00055005885	sus_scrofa_pietrain	ENSSSCP00055009063	100	100	sus_scrofa	ENSSSCP00000013249	100	100
ENSSSCG00055005885	sus_scrofa_pietrain	ENSSSCP00055009063	95.8974	92.5641	equus_caballus	ENSECAP00000087640	95.8974	92.5641
ENSSSCG00055005885	sus_scrofa_pietrain	ENSSSCP00055009063	100	100	sus_scrofa_berkshire	ENSSSCP00065010104	100	100
ENSSSCG00055005885	sus_scrofa_pietrain	ENSSSCP00055009063	99.7436	99.7436	sus_scrofa_tibetan	ENSSSCP00015016321	99.7436	99.7436
ENSSSCG00055005885	sus_scrofa_pietrain	ENSSSCP00055009063	100	100	sus_scrofa_usmarc	ENSSSCP00070048323	100	100
ENSSSCG00055005885	sus_scrofa_pietrain	ENSSSCP00055009063	97.1795	94.1026	ovis_aries_rambouillet	ENSOARP00020020851	97.1795	94.1026
ENSSSCG00055005885	sus_scrofa_pietrain	ENSSSCP00055009063	96.6667	93.0769	bos_taurus	ENSBTAP00000055293	96.6667	93.0769
ENSSSCG00055005885	sus_scrofa_pietrain	ENSSSCP00055009063	99.7436	99.7436	sus_scrofa_wuzhishan	ENSSSCP00005007498	99.4885	99.4885
ENSSSCG00055005885	sus_scrofa_pietrain	ENSSSCP00055009063	99.7436	99.7436	sus_scrofa_bamei	ENSSSCP00050017205	99.7436	99.7436
ENSSSCG00055005885	sus_scrofa_pietrain	ENSSSCP00055009063	99.7436	99.7436	sus_scrofa_jinhua	ENSSSCP00060023849	99.7436	99.7436
ENSSSCG00055005885	sus_scrofa_pietrain	ENSSSCP00055009063	100	100	sus_scrofa_landrace	ENSSSCP00045035670	100	100
ENSSSCG00055005885	sus_scrofa_pietrain	ENSSSCP00055009063	100	100	sus_scrofa_hampshire	ENSSSCP00035024836	100	100
ENSSSCG00055005885	sus_scrofa_pietrain	ENSSSCP00055009063	99.7436	99.7436	sus_scrofa_rongchang	ENSSSCP00030032755	99.7436	99.7436

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression