RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00055001343	Gene ID	100525050	Accession	-
Symbol	LENG9	Alias	-	Full Name	leukocyte receptor cluster member 9
Status	Confidence	Length	8249 bases	Strand	Minus strand
Position	LUXU01001013.1 : 85173 - 93421	RNA binding domain	AKAP7_NLS
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00055001854	AKAP7_NLS	PF10469	9.8e-17	1
ENSSSCP00055001861	AKAP7_NLS	PF10469	9.8e-17	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
LENG9-201	ENSSSCT00055002438	3493	532aa	ENSSSCP00055001854
LENG9-202	ENSSSCT00055002446	2495	532aa	ENSSSCP00055001861

Gene Model

Click here to download ENSSSCG00055001343's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00055001343's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00055001343

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00055001343	sus_scrofa_pietrain	ENSSSCP00055001854	100	99.812	sus_scrofa_largewhite	ENSSSCP00025041493	100	99.812
ENSSSCG00055001343	sus_scrofa_pietrain	ENSSSCP00055001854	100	100	sus_scrofa	ENSSSCP00000003545	100	100
ENSSSCG00055001343	sus_scrofa_pietrain	ENSSSCP00055001854	66.9173	61.4662	equus_caballus	ENSECAP00000063369	70.6349	64.881
ENSSSCG00055001343	sus_scrofa_pietrain	ENSSSCP00055001854	100	100	sus_scrofa_berkshire	ENSSSCP00065033418	100	100
ENSSSCG00055001343	sus_scrofa_pietrain	ENSSSCP00055001854	100	100	sus_scrofa_tibetan	ENSSSCP00015018174	100	100
ENSSSCG00055001343	sus_scrofa_pietrain	ENSSSCP00055001854	100	99.812	sus_scrofa_usmarc	ENSSSCP00070042730	100	99.812
ENSSSCG00055001343	sus_scrofa_pietrain	ENSSSCP00055001854	75	67.8571	bos_taurus	ENSBTAP00000015528	74.5794	67.4766
ENSSSCG00055001343	sus_scrofa_pietrain	ENSSSCP00055001854	100	99.812	sus_scrofa_meishan	ENSSSCP00040035371	100	99.812
ENSSSCG00055001343	sus_scrofa_pietrain	ENSSSCP00055001854	100	100	sus_scrofa_bamei	ENSSSCP00050013325	100	100
ENSSSCG00055001343	sus_scrofa_pietrain	ENSSSCP00055001854	100	100	sus_scrofa_jinhua	ENSSSCP00060005585	100	100
ENSSSCG00055001343	sus_scrofa_pietrain	ENSSSCP00055001854	100	100	sus_scrofa_landrace	ENSSSCP00045037425	100	100
ENSSSCG00055001343	sus_scrofa_pietrain	ENSSSCP00055001854	100	99.812	sus_scrofa_hampshire	ENSSSCP00035029761	100	99.812
ENSSSCG00055001343	sus_scrofa_pietrain	ENSSSCP00055001854	99.812	99.812	sus_scrofa_rongchang	ENSSSCP00030035684	99.812	99.812

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression