RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00050076969	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	1986 bases	Strand	Plus strand
Position	LUXV01070923.1 : 1714096 - 1716081	RNA binding domain	PurA
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00050046654	PurA	PF04845	7.5e-108	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSSSCT00050105848	1458	485aa	ENSSSCP00050046654

Gene Model

Click here to download ENSSSCG00050076969's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00050076969's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00050076969

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00050076969	sus_scrofa_bamei	ENSSSCP00050046654	98.3505	98.3505	sus_scrofa	ENSSSCP00000070354	98.9627	98.9627
ENSSSCG00050076969	sus_scrofa_bamei	ENSSSCP00050046654	89.6907	89.2784	equus_caballus	ENSECAP00000056594	89.1393	88.7295
ENSSSCG00050076969	sus_scrofa_bamei	ENSSSCP00050046654	66.1856	66.1856	bos_taurus	ENSBTAP00000040759	99.6894	99.6894
ENSSSCG00050076969	sus_scrofa_bamei	ENSSSCP00050046654	66.1856	66.1856	ovis_aries_rambouillet	ENSOARP00020026488	99.6894	99.6894

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression