Description

Ensembl ID ENSSSCG00050070269 Gene ID Accession -
Symbol EXOSC1 Alias - Full Name NA
Status Confidence Length 11980 bases Strand Minus strand
Position LUXV01106096.1 : 2008107 - 2020086 RNA binding domain ECR1_N , EXOSC1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00050041238 ECR1_N PF14382 3.7e-09 1
ENSSSCP00050041238 EXOSC1 PF10447 1.2e-14 2
ENSSSCP00050041236 ECR1_N PF14382 3.4e-07 1
ENSSSCP00050041236 EXOSC1 PF10447 2e-14 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
EXOSC1-201 ENSSSCT00050095797 5720 255aa ENSSSCP00050041236
EXOSC1-202 ENSSSCT00050095800 5597 214aa ENSSSCP00050041238

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00050070269

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00050070269sus_scrofa_bameiENSSSCP0005004123683.921683.9216sus_scrofa_usmarcENSSSCP00070025766100100
ENSSSCG00050070269sus_scrofa_bameiENSSSCP0005004123672.54972.1569sus_scrofaENSSSCP0000006458894.871894.359
ENSSSCG00050070269sus_scrofa_bameiENSSSCP0005004123698.823598.8235sus_scrofa_largewhiteENSSSCP0002504505798.823598.8235
ENSSSCG00050070269sus_scrofa_bameiENSSSCP0005004123665.882462.7451equus_caballusENSECAP0000004984778.504774.7664
ENSSSCG00050070269sus_scrofa_bameiENSSSCP0005004123676.470675.2941bos_taurusENSBTAP0000001687910098.4615
ENSSSCG00050070269sus_scrofa_bameiENSSSCP0005004123699.607899.6078sus_scrofa_wuzhishanENSSSCP0000504684299.607899.6078
ENSSSCG00050070269sus_scrofa_bameiENSSSCP00050041236100100sus_scrofa_jinhuaENSSSCP00060019456100100
ENSSSCG00050070269sus_scrofa_bameiENSSSCP00050041236100100sus_scrofa_landraceENSSSCP00045006450100100
ENSSSCG00050070269sus_scrofa_bameiENSSSCP0005004123699.607899.6078sus_scrofa_tibetanENSSSCP0001501245899.607899.6078
ENSSSCG00050070269sus_scrofa_bameiENSSSCP0005004123676.470676.4706sus_scrofa_pietrainENSSSCP00055031182100100
ENSSSCG00050070269sus_scrofa_bameiENSSSCP0005004123676.470676.4706sus_scrofa_hampshireENSSSCP00035009727100100
ENSSSCG00050070269sus_scrofa_bameiENSSSCP0005004123698.823598.8235sus_scrofa_berkshireENSSSCP0006500976698.823598.8235
ENSSSCG00050070269sus_scrofa_bameiENSSSCP0005004123676.470676.4706sus_scrofa_meishanENSSSCP00040023105100100
ENSSSCG00050070269sus_scrofa_bameiENSSSCP0005004123699.607899.6078sus_scrofa_rongchangENSSSCP0003001948499.607899.6078
ENSSSCG00050070269sus_scrofa_bameiENSSSCP0005004123676.078474.902ovis_aries_rambouilletENSOARP0002002198099.487297.9487

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression