Description

Ensembl ID ENSSSCG00050070182 Gene ID Accession -
Symbol SOBP Alias - Full Name NA
Status Confidence Length 153499 bases Strand Minus strand
Position LUXV01118647.1 : 1532186 - 1685684 RNA binding domain SOBP
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00050041203 SOBP PF15279 4.3e-99 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
SOBP-201 ENSSSCT00050095690 2766 873aa ENSSSCP00050041203
SOBP-202 ENSSSCT00050095694 869 149aa ENSSSCP00050041205

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00050070182sus_scrofa_bameiENSSSCP0005004236542.881427.6271sus_scrofa_bameiENSSSCP0005004120328.980518.6712

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00050070182sus_scrofa_bameiENSSSCP00050041203100100sus_scrofa_usmarcENSSSCP00070039524100100
ENSSSCG00050070182sus_scrofa_bameiENSSSCP00050041203100100sus_scrofaENSSSCP0000000472699.885699.8856
ENSSSCG00050070182sus_scrofa_bameiENSSSCP00050041203100100sus_scrofa_largewhiteENSSSCP0002504165699.885699.8856
ENSSSCG00050070182sus_scrofa_bameiENSSSCP0005004120398.7498.74equus_caballusENSECAP0000003520599.080599.0805
ENSSSCG00050070182sus_scrofa_bameiENSSSCP0005004120399.083698.6254bos_taurusENSBTAP0000002551999.197398.7385
ENSSSCG00050070182sus_scrofa_bameiENSSSCP0005004120381.901581.7869sus_scrofa_wuzhishanENSSSCP0000503281884.515484.3972
ENSSSCG00050070182sus_scrofa_bameiENSSSCP00050041203100100sus_scrofa_jinhuaENSSSCP00060025972100100
ENSSSCG00050070182sus_scrofa_bameiENSSSCP00050041203100100sus_scrofa_landraceENSSSCP0004502059499.885699.8856
ENSSSCG00050070182sus_scrofa_bameiENSSSCP0005004120394.272694.2726sus_scrofa_tibetanENSSSCP0001501222695.254695.2546
ENSSSCG00050070182sus_scrofa_bameiENSSSCP00050041203100100sus_scrofa_pietrainENSSSCP0005502340699.885699.8856
ENSSSCG00050070182sus_scrofa_bameiENSSSCP00050041203100100sus_scrofa_hampshireENSSSCP0003503540699.885699.8856
ENSSSCG00050070182sus_scrofa_bameiENSSSCP00050041203100100sus_scrofa_berkshireENSSSCP0006501056799.885699.8856
ENSSSCG00050070182sus_scrofa_bameiENSSSCP00050041203100100sus_scrofa_meishanENSSSCP00040045266100100
ENSSSCG00050070182sus_scrofa_bameiENSSSCP00050041203100100sus_scrofa_rongchangENSSSCP00030040568100100
ENSSSCG00050070182sus_scrofa_bameiENSSSCP0005004120398.7498.2818ovis_aries_rambouilletENSOARP0002001441898.7498.2818

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression