RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00050070182 | Gene ID |
|
Accession |
- |
Symbol |
SOBP |
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
153499 bases |
Strand |
Minus strand |
Position |
LUXV01118647.1 : 1532186 - 1685684 |
RNA binding domain |
SOBP |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00050041203 |
SOBP |
PF15279 |
4.3e-99 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
SOBP-201 |
ENSSSCT00050095690 |
2766 |
873aa |
ENSSSCP00050041203 |
SOBP-202 |
ENSSSCT00050095694 |
869 |
149aa |
ENSSSCP00050041205 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00050070182 | sus_scrofa_bamei | ENSSSCP00050042365 | 42.8814 | 27.6271 | sus_scrofa_bamei | ENSSSCP00050041203 | 28.9805 | 18.6712 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00050070182 | sus_scrofa_bamei | ENSSSCP00050041203 | 100 | 100 | sus_scrofa_usmarc | ENSSSCP00070039524 | 100 | 100 |
ENSSSCG00050070182 | sus_scrofa_bamei | ENSSSCP00050041203 | 100 | 100 | sus_scrofa | ENSSSCP00000004726 | 99.8856 | 99.8856 |
ENSSSCG00050070182 | sus_scrofa_bamei | ENSSSCP00050041203 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025041656 | 99.8856 | 99.8856 |
ENSSSCG00050070182 | sus_scrofa_bamei | ENSSSCP00050041203 | 98.74 | 98.74 | equus_caballus | ENSECAP00000035205 | 99.0805 | 99.0805 |
ENSSSCG00050070182 | sus_scrofa_bamei | ENSSSCP00050041203 | 99.0836 | 98.6254 | bos_taurus | ENSBTAP00000025519 | 99.1973 | 98.7385 |
ENSSSCG00050070182 | sus_scrofa_bamei | ENSSSCP00050041203 | 81.9015 | 81.7869 | sus_scrofa_wuzhishan | ENSSSCP00005032818 | 84.5154 | 84.3972 |
ENSSSCG00050070182 | sus_scrofa_bamei | ENSSSCP00050041203 | 100 | 100 | sus_scrofa_jinhua | ENSSSCP00060025972 | 100 | 100 |
ENSSSCG00050070182 | sus_scrofa_bamei | ENSSSCP00050041203 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045020594 | 99.8856 | 99.8856 |
ENSSSCG00050070182 | sus_scrofa_bamei | ENSSSCP00050041203 | 94.2726 | 94.2726 | sus_scrofa_tibetan | ENSSSCP00015012226 | 95.2546 | 95.2546 |
ENSSSCG00050070182 | sus_scrofa_bamei | ENSSSCP00050041203 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055023406 | 99.8856 | 99.8856 |
ENSSSCG00050070182 | sus_scrofa_bamei | ENSSSCP00050041203 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035035406 | 99.8856 | 99.8856 |
ENSSSCG00050070182 | sus_scrofa_bamei | ENSSSCP00050041203 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065010567 | 99.8856 | 99.8856 |
ENSSSCG00050070182 | sus_scrofa_bamei | ENSSSCP00050041203 | 100 | 100 | sus_scrofa_meishan | ENSSSCP00040045266 | 100 | 100 |
ENSSSCG00050070182 | sus_scrofa_bamei | ENSSSCP00050041203 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030040568 | 100 | 100 |
ENSSSCG00050070182 | sus_scrofa_bamei | ENSSSCP00050041203 | 98.74 | 98.2818 | ovis_aries_rambouillet | ENSOARP00020014418 | 98.74 | 98.2818 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |