| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00050060014 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
73292 bases |
Strand |
Plus strand |
| Position |
LUXV01106222.1 : 3052602 - 3125893 |
RNA binding domain |
tRNA-synt_1g , tRNA-synt_1 , Anticodon_1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00050035107 |
tRNA-synt_1g |
PF09334 |
5e-24 |
1 |
| ENSSSCP00050035107 |
tRNA-synt_1 |
PF00133 |
1.6e-168 |
2 |
| ENSSSCP00050035107 |
Anticodon_1 |
PF08264 |
5.4e-26 |
3 |
| ENSSSCP00050035115 |
tRNA-synt_1g |
PF09334 |
5.4e-24 |
1 |
| ENSSSCP00050035115 |
tRNA-synt_1 |
PF00133 |
1.4e-168 |
2 |
| ENSSSCP00050035115 |
Anticodon_1 |
PF08264 |
5.8e-26 |
3 |
| ENSSSCP00050035118 |
tRNA-synt_1g |
PF09334 |
7e-24 |
1 |
| ENSSSCP00050035118 |
tRNA-synt_1 |
PF00133 |
1.8e-168 |
2 |
| ENSSSCP00050035118 |
Anticodon_1 |
PF08264 |
6.3e-26 |
3 |
| ENSSSCP00050035120 |
tRNA-synt_1g |
PF09334 |
7.4e-24 |
1 |
| ENSSSCP00050035120 |
tRNA-synt_1 |
PF00133 |
1.7e-168 |
2 |
| ENSSSCP00050035120 |
Anticodon_1 |
PF08264 |
6.2e-26 |
3 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00050081765 |
3297 |
936aa |
ENSSSCP00050035107 |
| - |
ENSSSCT00050081780 |
8459 |
928aa |
ENSSSCP00050035115 |
| - |
ENSSSCT00050081785 |
3611 |
1012aa |
ENSSSCP00050035118 |
| - |
ENSSSCT00050081789 |
3137 |
999aa |
ENSSSCP00050035120 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00050060014 | sus_scrofa_bamei | ENSSSCP00050006837 | 29.249 | 17.6285 | sus_scrofa_bamei | ENSSSCP00050035118 | 36.5613 | 22.0356 |
| ENSSSCG00050060014 | sus_scrofa_bamei | ENSSSCP00050037371 | 27.6053 | 14.745 | sus_scrofa_bamei | ENSSSCP00050035118 | 24.6047 | 13.1423 |
| ENSSSCG00050060014 | sus_scrofa_bamei | ENSSSCP00050006277 | 24.4514 | 10.6583 | sus_scrofa_bamei | ENSSSCP00050035118 | 23.1225 | 10.0791 |
| ENSSSCG00050060014 | sus_scrofa_bamei | ENSSSCP00050017822 | 24.4931 | 10.7867 | sus_scrofa_bamei | ENSSSCP00050035118 | 29.8419 | 13.1423 |
| ENSSSCG00050060014 | sus_scrofa_bamei | ENSSSCP00050002972 | 32.58 | 19.4915 | sus_scrofa_bamei | ENSSSCP00050035118 | 34.1897 | 20.4545 |
| ENSSSCG00050060014 | sus_scrofa_bamei | ENSSSCP00050031197 | 26.6244 | 14.8177 | sus_scrofa_bamei | ENSSSCP00050035118 | 33.2016 | 18.4783 |
| ENSSSCG00050060014 | sus_scrofa_bamei | ENSSSCP00050002153 | 34.0067 | 18.6869 | sus_scrofa_bamei | ENSSSCP00050035118 | 19.9605 | 10.9684 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00050060014 | sus_scrofa_bamei | ENSSSCP00050035118 | 99.7036 | 99.7036 | sus_scrofa_usmarc | ENSSSCP00070017647 | 99.8022 | 99.8022 |
| ENSSSCG00050060014 | sus_scrofa_bamei | ENSSSCP00050035118 | 99.9012 | 99.9012 | sus_scrofa | ENSSSCP00000069528 | 99.9012 | 99.9012 |
| ENSSSCG00050060014 | sus_scrofa_bamei | ENSSSCP00050035118 | 96.4427 | 96.2451 | sus_scrofa_largewhite | ENSSSCP00025008847 | 97.6977 | 97.4975 |
| ENSSSCG00050060014 | sus_scrofa_bamei | ENSSSCP00050035118 | 95.3557 | 90.1186 | equus_caballus | ENSECAP00000041874 | 95.3557 | 90.1186 |
| ENSSSCG00050060014 | sus_scrofa_bamei | ENSSSCP00050035118 | 95.3557 | 91.0079 | bos_taurus | ENSBTAP00000053447 | 95.3557 | 91.0079 |
| ENSSSCG00050060014 | sus_scrofa_bamei | ENSSSCP00050035118 | 42.7866 | 29.8419 | sus_scrofa_wuzhishan | ENSSSCP00005009258 | 55.1592 | 38.4713 |
| ENSSSCG00050060014 | sus_scrofa_bamei | ENSSSCP00050035118 | 86.8577 | 86.7589 | sus_scrofa_wuzhishan | ENSSSCP00005017628 | 90.6186 | 90.5155 |
| ENSSSCG00050060014 | sus_scrofa_bamei | ENSSSCP00050035118 | 97.332 | 96.0474 | sus_scrofa_jinhua | ENSSSCP00060027744 | 97.14 | 95.858 |
| ENSSSCG00050060014 | sus_scrofa_bamei | ENSSSCP00050035118 | 95.5534 | 95.1581 | sus_scrofa_landrace | ENSSSCP00045040843 | 98.8753 | 98.4663 |
| ENSSSCG00050060014 | sus_scrofa_bamei | ENSSSCP00050035118 | 96.1462 | 96.1462 | sus_scrofa_tibetan | ENSSSCP00015028761 | 96.1462 | 96.1462 |
| ENSSSCG00050060014 | sus_scrofa_bamei | ENSSSCP00050035118 | 99.8024 | 99.8024 | sus_scrofa_pietrain | ENSSSCP00055012344 | 99.8024 | 99.8024 |
| ENSSSCG00050060014 | sus_scrofa_bamei | ENSSSCP00050035118 | 99.9012 | 99.9012 | sus_scrofa_hampshire | ENSSSCP00035022334 | 99.9012 | 99.9012 |
| ENSSSCG00050060014 | sus_scrofa_bamei | ENSSSCP00050035118 | 99.9012 | 99.9012 | sus_scrofa_berkshire | ENSSSCP00065012329 | 99.9012 | 99.9012 |
| ENSSSCG00050060014 | sus_scrofa_bamei | ENSSSCP00050035118 | 99.9012 | 99.9012 | sus_scrofa_meishan | ENSSSCP00040033986 | 99.9012 | 99.9012 |
| ENSSSCG00050060014 | sus_scrofa_bamei | ENSSSCP00050035118 | 98.6166 | 97.9249 | sus_scrofa_rongchang | ENSSSCP00030029273 | 98.4221 | 97.7318 |
| ENSSSCG00050060014 | sus_scrofa_bamei | ENSSSCP00050035118 | 95.2569 | 91.6996 | ovis_aries_rambouillet | ENSOARP00020011478 | 95.2569 | 91.6996 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
