| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00050031957 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
100802 bases |
Strand |
Plus strand |
| Position |
LUXV01061402.1 : 1525693 - 1626494 |
RNA binding domain |
tRNA-synt_1g , tRNA-synt_1e , tRNA-synt_1 , Anticodon_1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00050017816 |
tRNA-synt_1g |
PF09334 |
3.2e-17 |
1 |
| ENSSSCP00050017816 |
tRNA-synt_1g |
PF09334 |
3.2e-17 |
2 |
| ENSSSCP00050017816 |
tRNA-synt_1e |
PF01406 |
1.1e-06 |
3 |
| ENSSSCP00050017816 |
tRNA-synt_1 |
PF00133 |
1.5e-41 |
4 |
| ENSSSCP00050017816 |
tRNA-synt_1 |
PF00133 |
1.5e-41 |
5 |
| ENSSSCP00050017816 |
Anticodon_1 |
PF08264 |
4.8e-11 |
6 |
| ENSSSCP00050017835 |
tRNA-synt_1g |
PF09334 |
3.3e-17 |
1 |
| ENSSSCP00050017835 |
tRNA-synt_1g |
PF09334 |
3.3e-17 |
2 |
| ENSSSCP00050017835 |
tRNA-synt_1e |
PF01406 |
1.1e-06 |
3 |
| ENSSSCP00050017835 |
tRNA-synt_1 |
PF00133 |
1.5e-41 |
4 |
| ENSSSCP00050017835 |
tRNA-synt_1 |
PF00133 |
1.5e-41 |
5 |
| ENSSSCP00050017835 |
Anticodon_1 |
PF08264 |
4.8e-11 |
6 |
| ENSSSCP00050017847 |
tRNA-synt_1g |
PF09334 |
3.4e-17 |
1 |
| ENSSSCP00050017847 |
tRNA-synt_1g |
PF09334 |
3.4e-17 |
2 |
| ENSSSCP00050017847 |
tRNA-synt_1e |
PF01406 |
1.1e-06 |
3 |
| ENSSSCP00050017847 |
tRNA-synt_1 |
PF00133 |
1.5e-41 |
4 |
| ENSSSCP00050017847 |
tRNA-synt_1 |
PF00133 |
1.5e-41 |
5 |
| ENSSSCP00050017847 |
Anticodon_1 |
PF08264 |
4.8e-11 |
6 |
| ENSSSCP00050017840 |
tRNA-synt_1g |
PF09334 |
3.4e-17 |
1 |
| ENSSSCP00050017840 |
tRNA-synt_1g |
PF09334 |
3.4e-17 |
2 |
| ENSSSCP00050017840 |
tRNA-synt_1e |
PF01406 |
1.1e-06 |
3 |
| ENSSSCP00050017840 |
tRNA-synt_1 |
PF00133 |
1.6e-41 |
4 |
| ENSSSCP00050017840 |
tRNA-synt_1 |
PF00133 |
1.6e-41 |
5 |
| ENSSSCP00050017840 |
Anticodon_1 |
PF08264 |
4.8e-11 |
6 |
| ENSSSCP00050017825 |
tRNA-synt_1g |
PF09334 |
3.6e-17 |
1 |
| ENSSSCP00050017825 |
tRNA-synt_1g |
PF09334 |
3.6e-17 |
2 |
| ENSSSCP00050017825 |
tRNA-synt_1e |
PF01406 |
1.1e-06 |
3 |
| ENSSSCP00050017825 |
tRNA-synt_1 |
PF00133 |
1.7e-41 |
4 |
| ENSSSCP00050017825 |
tRNA-synt_1 |
PF00133 |
1.7e-41 |
5 |
| ENSSSCP00050017825 |
Anticodon_1 |
PF08264 |
1.1e-16 |
6 |
| ENSSSCP00050017822 |
tRNA-synt_1g |
PF09334 |
3.9e-17 |
1 |
| ENSSSCP00050017822 |
tRNA-synt_1g |
PF09334 |
3.9e-17 |
2 |
| ENSSSCP00050017822 |
tRNA-synt_1e |
PF01406 |
1.2e-06 |
3 |
| ENSSSCP00050017822 |
tRNA-synt_1 |
PF00133 |
2.1e-41 |
4 |
| ENSSSCP00050017822 |
tRNA-synt_1 |
PF00133 |
2.1e-41 |
5 |
| ENSSSCP00050017822 |
Anticodon_1 |
PF08264 |
1.2e-16 |
6 |
| ENSSSCP00050017826 |
tRNA-synt_1g |
PF09334 |
4e-17 |
1 |
| ENSSSCP00050017826 |
tRNA-synt_1g |
PF09334 |
4e-17 |
2 |
| ENSSSCP00050017826 |
tRNA-synt_1e |
PF01406 |
1.2e-06 |
3 |
| ENSSSCP00050017826 |
tRNA-synt_1 |
PF00133 |
1.9e-41 |
4 |
| ENSSSCP00050017826 |
tRNA-synt_1 |
PF00133 |
1.9e-41 |
5 |
| ENSSSCP00050017826 |
Anticodon_1 |
PF08264 |
1.2e-16 |
6 |
| ENSSSCP00050017811 |
tRNA-synt_1g |
PF09334 |
3.7e-13 |
1 |
| ENSSSCP00050017811 |
tRNA-synt_1e |
PF01406 |
1.1e-06 |
2 |
| ENSSSCP00050017811 |
tRNA-synt_1 |
PF00133 |
4.8e-34 |
3 |
| ENSSSCP00050017811 |
Anticodon_1 |
PF08264 |
1e-16 |
4 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00050043124 |
5230 |
1122aa |
ENSSSCP00050017811 |
| - |
ENSSSCT00050043136 |
5134 |
1144aa |
ENSSSCP00050017816 |
| - |
ENSSSCT00050043145 |
4024 |
1233aa |
ENSSSCP00050017822 |
| - |
ENSSSCT00050043151 |
4331 |
1182aa |
ENSSSCP00050017825 |
| - |
ENSSSCT00050043155 |
5178 |
1215aa |
ENSSSCP00050017826 |
| - |
ENSSSCT00050043172 |
4966 |
1144aa |
ENSSSCP00050017835 |
| - |
ENSSSCT00050043182 |
4978 |
1148aa |
ENSSSCP00050017840 |
| - |
ENSSSCT00050043196 |
4966 |
1144aa |
ENSSSCP00050017847 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00050031957 | sus_scrofa_bamei | ENSSSCP00050006837 | 23.7154 | 11.4625 | sus_scrofa_bamei | ENSSSCP00050017822 | 24.3309 | 11.7599 |
| ENSSSCG00050031957 | sus_scrofa_bamei | ENSSSCP00050037371 | 29.3792 | 13.7472 | sus_scrofa_bamei | ENSSSCP00050017822 | 21.4923 | 10.0568 |
| ENSSSCG00050031957 | sus_scrofa_bamei | ENSSSCP00050006277 | 25.4963 | 9.61337 | sus_scrofa_bamei | ENSSSCP00050017822 | 19.7891 | 7.46148 |
| ENSSSCG00050031957 | sus_scrofa_bamei | ENSSSCP00050002972 | 28.5311 | 13.371 | sus_scrofa_bamei | ENSSSCP00050017822 | 24.5742 | 11.5166 |
| ENSSSCG00050031957 | sus_scrofa_bamei | ENSSSCP00050031197 | 24.3265 | 11.252 | sus_scrofa_bamei | ENSSSCP00050017822 | 24.8986 | 11.5166 |
| ENSSSCG00050031957 | sus_scrofa_bamei | ENSSSCP00050002153 | 31.3131 | 14.4781 | sus_scrofa_bamei | ENSSSCP00050017822 | 15.0852 | 6.97486 |
| ENSSSCG00050031957 | sus_scrofa_bamei | ENSSSCP00050035118 | 29.8419 | 13.1423 | sus_scrofa_bamei | ENSSSCP00050017822 | 24.4931 | 10.7867 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00050031957 | sus_scrofa_bamei | ENSSSCP00050017822 | 88.0779 | 87.1857 | sus_scrofa_usmarc | ENSSSCP00070007040 | 96.7053 | 95.7257 |
| ENSSSCG00050031957 | sus_scrofa_bamei | ENSSSCP00050017822 | 92.2952 | 91.4842 | sus_scrofa | ENSSSCP00000072832 | 96.8511 | 96 |
| ENSSSCG00050031957 | sus_scrofa_bamei | ENSSSCP00050017822 | 92.3763 | 91.7275 | sus_scrofa_largewhite | ENSSSCP00025024463 | 95.7143 | 95.042 |
| ENSSSCG00050031957 | sus_scrofa_bamei | ENSSSCP00050017822 | 89.6188 | 85.2393 | equus_caballus | ENSECAP00000090615 | 92.7013 | 88.1711 |
| ENSSSCG00050031957 | sus_scrofa_bamei | ENSSSCP00050017822 | 90.1054 | 85.6448 | bos_taurus | ENSBTAP00000008902 | 94.4728 | 89.7959 |
| ENSSSCG00050031957 | sus_scrofa_bamei | ENSSSCP00050017822 | 88.97 | 88.0779 | sus_scrofa_wuzhishan | ENSSSCP00005023874 | 95.1431 | 94.1891 |
| ENSSSCG00050031957 | sus_scrofa_bamei | ENSSSCP00050017822 | 99.9189 | 99.8378 | sus_scrofa_jinhua | ENSSSCP00060018257 | 99.9189 | 99.8378 |
| ENSSSCG00050031957 | sus_scrofa_bamei | ENSSSCP00050017822 | 97.8913 | 97.3236 | sus_scrofa_landrace | ENSSSCP00045038045 | 96.9478 | 96.3855 |
| ENSSSCG00050031957 | sus_scrofa_bamei | ENSSSCP00050017822 | 87.7534 | 86.2936 | sus_scrofa_tibetan | ENSSSCP00015015405 | 94.5804 | 93.007 |
| ENSSSCG00050031957 | sus_scrofa_bamei | ENSSSCP00050017822 | 92.3763 | 91.5653 | sus_scrofa_pietrain | ENSSSCP00055044752 | 95.7143 | 94.8739 |
| ENSSSCG00050031957 | sus_scrofa_bamei | ENSSSCP00050017822 | 92.3763 | 91.6464 | sus_scrofa_hampshire | ENSSSCP00035002767 | 95.7143 | 94.958 |
| ENSSSCG00050031957 | sus_scrofa_bamei | ENSSSCP00050017822 | 99.9189 | 99.9189 | sus_scrofa_berkshire | ENSSSCP00065046360 | 99.9189 | 99.9189 |
| ENSSSCG00050031957 | sus_scrofa_bamei | ENSSSCP00050017822 | 96.1882 | 95.8637 | sus_scrofa_meishan | ENSSSCP00040000872 | 96.5798 | 96.2541 |
| ENSSSCG00050031957 | sus_scrofa_bamei | ENSSSCP00050017822 | 97.8102 | 97.3236 | sus_scrofa_rongchang | ENSSSCP00030044135 | 96.8675 | 96.3855 |
| ENSSSCG00050031957 | sus_scrofa_bamei | ENSSSCP00050017822 | 90.1054 | 85.5637 | ovis_aries_rambouillet | ENSOARP00020028522 | 94.4728 | 89.7109 |
| ENSSSCG00050031957 | sus_scrofa_bamei | ENSSSCP00050017822 | 90.1054 | 85.6448 | ovis_aries_rambouillet | ENSOARP00020026191 | 94.4728 | 89.7959 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
