| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00050012314 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
13607 bases |
Strand |
Minus strand |
| Position |
LUXV01002871.1 : 842475 - 856081 |
RNA binding domain |
tRNA-synt_1g , tRNA-synt_1 , Anticodon_1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00050006822 |
tRNA-synt_1g |
PF09334 |
6.2e-11 |
1 |
| ENSSSCP00050006822 |
tRNA-synt_1 |
PF00133 |
6e-203 |
2 |
| ENSSSCP00050006822 |
Anticodon_1 |
PF08264 |
5.1e-27 |
3 |
| ENSSSCP00050006840 |
tRNA-synt_1g |
PF09334 |
7.4e-11 |
1 |
| ENSSSCP00050006840 |
tRNA-synt_1 |
PF00133 |
6.9e-203 |
2 |
| ENSSSCP00050006840 |
Anticodon_1 |
PF08264 |
1e-32 |
3 |
| ENSSSCP00050006837 |
tRNA-synt_1g |
PF09334 |
8.7e-11 |
1 |
| ENSSSCP00050006837 |
tRNA-synt_1 |
PF00133 |
7.8e-203 |
2 |
| ENSSSCP00050006837 |
Anticodon_1 |
PF08264 |
1.1e-32 |
3 |
| ENSSSCP00050006850 |
tRNA-synt_1g |
PF09334 |
1.5e-10 |
1 |
| ENSSSCP00050006850 |
tRNA-synt_1 |
PF00133 |
6e-203 |
2 |
| ENSSSCP00050006850 |
Anticodon_1 |
PF08264 |
4.6e-27 |
3 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00050016612 |
4102 |
1168aa |
ENSSSCP00050006822 |
| - |
ENSSSCT00050016645 |
4297 |
1265aa |
ENSSSCP00050006837 |
| - |
ENSSSCT00050016653 |
4072 |
1220aa |
ENSSSCP00050006840 |
| - |
ENSSSCT00050016678 |
3732 |
1243aa |
ENSSSCP00050006850 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00050012314 | sus_scrofa_bamei | ENSSSCP00050037371 | 31.8182 | 17.2949 | sus_scrofa_bamei | ENSSSCP00050006837 | 22.6877 | 12.332 |
| ENSSSCG00050012314 | sus_scrofa_bamei | ENSSSCP00050006277 | 27.1682 | 12.8527 | sus_scrofa_bamei | ENSSSCP00050006837 | 20.5534 | 9.72332 |
| ENSSSCG00050012314 | sus_scrofa_bamei | ENSSSCP00050017822 | 24.3309 | 11.7599 | sus_scrofa_bamei | ENSSSCP00050006837 | 23.7154 | 11.4625 |
| ENSSSCG00050012314 | sus_scrofa_bamei | ENSSSCP00050002972 | 64.6893 | 49.9058 | sus_scrofa_bamei | ENSSSCP00050006837 | 54.3083 | 41.8972 |
| ENSSSCG00050012314 | sus_scrofa_bamei | ENSSSCP00050031197 | 24.2472 | 12.916 | sus_scrofa_bamei | ENSSSCP00050006837 | 24.1897 | 12.8854 |
| ENSSSCG00050012314 | sus_scrofa_bamei | ENSSSCP00050002153 | 35.8586 | 19.5286 | sus_scrofa_bamei | ENSSSCP00050006837 | 16.8379 | 9.16996 |
| ENSSSCG00050012314 | sus_scrofa_bamei | ENSSSCP00050035118 | 36.5613 | 22.0356 | sus_scrofa_bamei | ENSSSCP00050006837 | 29.249 | 17.6285 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00050012314 | sus_scrofa_bamei | ENSSSCP00050006837 | 98.1818 | 97.7866 | sus_scrofa_usmarc | ENSSSCP00070039596 | 95.0268 | 94.6442 |
| ENSSSCG00050012314 | sus_scrofa_bamei | ENSSSCP00050006837 | 96.2055 | 95.8893 | sus_scrofa | ENSSSCP00000058218 | 98.3832 | 98.0598 |
| ENSSSCG00050012314 | sus_scrofa_bamei | ENSSSCP00050006837 | 99.8419 | 99.8419 | sus_scrofa_largewhite | ENSSSCP00025046908 | 99.8419 | 99.8419 |
| ENSSSCG00050012314 | sus_scrofa_bamei | ENSSSCP00050006837 | 98.1028 | 95.4941 | equus_caballus | ENSECAP00000013051 | 98.1028 | 95.4941 |
| ENSSSCG00050012314 | sus_scrofa_bamei | ENSSSCP00050006837 | 98.498 | 96.3636 | bos_taurus | ENSBTAP00000007404 | 98.576 | 96.4399 |
| ENSSSCG00050012314 | sus_scrofa_bamei | ENSSSCP00050006837 | 96.2055 | 96.2055 | sus_scrofa_wuzhishan | ENSSSCP00005040629 | 97.516 | 97.516 |
| ENSSSCG00050012314 | sus_scrofa_bamei | ENSSSCP00050006837 | 99.921 | 99.8419 | sus_scrofa_jinhua | ENSSSCP00060037139 | 99.921 | 99.8419 |
| ENSSSCG00050012314 | sus_scrofa_bamei | ENSSSCP00050006837 | 98.419 | 98.3399 | sus_scrofa_landrace | ENSSSCP00045048987 | 92.9104 | 92.8358 |
| ENSSSCG00050012314 | sus_scrofa_bamei | ENSSSCP00050006837 | 99.8419 | 99.8419 | sus_scrofa_tibetan | ENSSSCP00015047081 | 99.8419 | 99.8419 |
| ENSSSCG00050012314 | sus_scrofa_bamei | ENSSSCP00050006837 | 98.498 | 98.419 | sus_scrofa_pietrain | ENSSSCP00055045562 | 92.9851 | 92.9104 |
| ENSSSCG00050012314 | sus_scrofa_bamei | ENSSSCP00050006837 | 98.8142 | 98.5771 | sus_scrofa_hampshire | ENSSSCP00035008644 | 97.7326 | 97.498 |
| ENSSSCG00050012314 | sus_scrofa_bamei | ENSSSCP00050006837 | 99.8419 | 99.7628 | sus_scrofa_berkshire | ENSSSCP00065026837 | 99.8419 | 99.7628 |
| ENSSSCG00050012314 | sus_scrofa_bamei | ENSSSCP00050006837 | 99.921 | 99.921 | sus_scrofa_meishan | ENSSSCP00040027367 | 99.921 | 99.921 |
| ENSSSCG00050012314 | sus_scrofa_bamei | ENSSSCP00050006837 | 98.3399 | 98.2609 | sus_scrofa_rongchang | ENSSSCP00030036316 | 92.8358 | 92.7612 |
| ENSSSCG00050012314 | sus_scrofa_bamei | ENSSSCP00050006837 | 98.1818 | 96.1265 | ovis_aries_rambouillet | ENSOARP00020016132 | 98.2595 | 96.2025 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
