| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00050011569 | Gene ID |
|
Accession |
- |
| Symbol |
SMARCA2 |
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
242237 bases |
Strand |
Plus strand |
| Position |
LUXV01032358.1 : 259450 - 501686 |
RNA binding domain |
ResIII , BRK |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00050006421 |
ResIII |
PF04851 |
3.4e-08 |
1 |
| ENSSSCP00050006421 |
BRK |
PF07533 |
2.6e-15 |
2 |
| ENSSSCP00050006424 |
ResIII |
PF04851 |
3.5e-08 |
1 |
| ENSSSCP00050006424 |
BRK |
PF07533 |
1.2e-17 |
2 |
| ENSSSCP00050006392 |
ResIII |
PF04851 |
3.6e-08 |
1 |
| ENSSSCP00050006392 |
BRK |
PF07533 |
1.2e-17 |
2 |
| ENSSSCP00050006418 |
ResIII |
PF04851 |
3.6e-08 |
1 |
| ENSSSCP00050006418 |
BRK |
PF07533 |
1.2e-17 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| SMARCA2-201 |
ENSSSCT00050015670 |
5942 |
1573aa |
ENSSSCP00050006392 |
| SMARCA2-202 |
ENSSSCT00050015681 |
6290 |
296aa |
ENSSSCP00050006397 |
| SMARCA2-203 |
ENSSSCT00050015711 |
5734 |
236aa |
ENSSSCP00050006414 |
| SMARCA2-205 |
ENSSSCT00050015715 |
5021 |
1574aa |
ENSSSCP00050006418 |
| SMARCA2-204 |
ENSSSCT00050015718 |
4850 |
1517aa |
ENSSSCP00050006421 |
| SMARCA2-206 |
ENSSSCT00050015722 |
5751 |
1555aa |
ENSSSCP00050006424 |
| SMARCA2-207 |
ENSSSCT00050015729 |
1791 |
276aa |
ENSSSCP00050006428 |
| SMARCA2-208 |
ENSSSCT00050015736 |
1677 |
278aa |
ENSSSCP00050006433 |
| SMARCA2-209 |
ENSSSCT00050015738 |
1785 |
260aa |
ENSSSCP00050006434 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050038642 | 38.0117 | 22.9045 | sus_scrofa_bamei | ENSSSCP00050006418 | 24.7776 | 14.9301 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050022664 | 19.1663 | 9.7262 | sus_scrofa_bamei | ENSSSCP00050006418 | 29.7967 | 15.1207 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050037361 | 28.1947 | 15.9567 | sus_scrofa_bamei | ENSSSCP00050006418 | 26.493 | 14.9936 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050007050 | 27.877 | 17.2619 | sus_scrofa_bamei | ENSSSCP00050006418 | 17.8526 | 11.0546 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050029062 | 81.7683 | 74.3293 | sus_scrofa_bamei | ENSSSCP00050006418 | 85.197 | 77.446 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050011902 | 26.7292 | 16.4713 | sus_scrofa_bamei | ENSSSCP00050006418 | 28.9708 | 17.8526 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050011183 | 18.2039 | 10.8877 | sus_scrofa_bamei | ENSSSCP00050006418 | 33.3545 | 19.9492 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050043546 | 29.1099 | 16.0209 | sus_scrofa_bamei | ENSSSCP00050006418 | 17.662 | 9.72046 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050001511 | 38.9558 | 22.6238 | sus_scrofa_bamei | ENSSSCP00050006418 | 18.4879 | 10.737 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050032120 | 25.9557 | 14.2857 | sus_scrofa_bamei | ENSSSCP00050006418 | 16.3914 | 9.0216 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050039151 | 26.5437 | 16.1989 | sus_scrofa_bamei | ENSSSCP00050006418 | 21.0292 | 12.8335 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050025090 | 25.9977 | 16.1385 | sus_scrofa_bamei | ENSSSCP00050006418 | 28.1449 | 17.4714 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050042537 | 24.0671 | 13.629 | sus_scrofa_bamei | ENSSSCP00050006418 | 28.2719 | 16.0102 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050007026 | 38.6428 | 24.8822 | sus_scrofa_bamei | ENSSSCP00050006418 | 26.0483 | 16.7726 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050013051 | 38.5084 | 23.4399 | sus_scrofa_bamei | ENSSSCP00050006418 | 16.0737 | 9.78399 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050003684 | 22.8288 | 13.7097 | sus_scrofa_bamei | ENSSSCP00050006418 | 23.3799 | 14.0407 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050025882 | 18.1026 | 10.9621 | sus_scrofa_bamei | ENSSSCP00050006418 | 34.3075 | 20.7751 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050002495 | 22.6813 | 13.7015 | sus_scrofa_bamei | ENSSSCP00050006418 | 34.1804 | 20.648 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050046328 | 45.7587 | 29.3907 | sus_scrofa_bamei | ENSSSCP00050006418 | 24.3329 | 15.629 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050045436 | 25.4761 | 15.2342 | sus_scrofa_bamei | ENSSSCP00050006418 | 31.4485 | 18.8056 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050003482 | 39.2897 | 26.7481 | sus_scrofa_bamei | ENSSSCP00050006418 | 22.4905 | 15.3113 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050047064 | 17.7307 | 10.6827 | sus_scrofa_bamei | ENSSSCP00050006418 | 35.6417 | 21.474 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050024954 | 28.4868 | 17.0395 | sus_scrofa_bamei | ENSSSCP00050006418 | 27.5095 | 16.4549 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050004901 | 25.0125 | 15.0575 | sus_scrofa_bamei | ENSSSCP00050006418 | 31.7662 | 19.1233 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050020261 | 29.5883 | 15.5232 | sus_scrofa_bamei | ENSSSCP00050006418 | 21.9187 | 11.4994 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050044371 | 16.9322 | 10.403 | sus_scrofa_bamei | ENSSSCP00050006418 | 34.4346 | 21.1563 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050036033 | 25.641 | 15.4359 | sus_scrofa_bamei | ENSSSCP00050006418 | 31.7662 | 19.1233 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050044067 | 15.4529 | 8.11131 | sus_scrofa_bamei | ENSSSCP00050006418 | 16.582 | 8.70394 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050023778 | 39.5813 | 25.8225 | sus_scrofa_bamei | ENSSSCP00050006418 | 25.2224 | 16.4549 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050009578 | 17.8742 | 11.1806 | sus_scrofa_bamei | ENSSSCP00050006418 | 30.8767 | 19.3139 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050006418 | 99.2376 | 99.2376 | sus_scrofa_usmarc | ENSSSCP00070050002 | 99.3007 | 99.3007 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050006418 | 16.1372 | 15.3748 | sus_scrofa | ENSSSCP00000043121 | 91.3669 | 87.0504 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050006418 | 98.2846 | 98.1576 | sus_scrofa_largewhite | ENSSSCP00025014827 | 97.541 | 97.4149 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050006418 | 17.2173 | 16.5184 | equus_caballus | ENSECAP00000022022 | 92.1769 | 88.4354 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050006418 | 97.7764 | 97.5222 | bos_taurus | ENSBTAP00000057766 | 99.0348 | 98.7774 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050006418 | 99.3647 | 99.3647 | sus_scrofa_wuzhishan | ENSSSCP00005032574 | 99.6178 | 99.6178 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050006418 | 92.0584 | 91.9949 | sus_scrofa_jinhua | ENSSSCP00060029599 | 99.0431 | 98.9747 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050006418 | 99.8729 | 99.8729 | sus_scrofa_landrace | ENSSSCP00045021099 | 99.8729 | 99.8729 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050006418 | 99.3647 | 99.3647 | sus_scrofa_tibetan | ENSSSCP00015010329 | 99.4278 | 99.4278 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050006418 | 99.3011 | 99.3011 | sus_scrofa_pietrain | ENSSSCP00055005032 | 99.3643 | 99.3643 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050006418 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035025371 | 100 | 100 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050006418 | 99.8729 | 99.8729 | sus_scrofa_berkshire | ENSSSCP00065025786 | 99.8729 | 99.8729 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050006418 | 98.4117 | 98.2846 | sus_scrofa_meishan | ENSSSCP00040031711 | 97.6671 | 97.541 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050006418 | 99.9365 | 99.9365 | sus_scrofa_rongchang | ENSSSCP00030047132 | 99.9365 | 99.9365 |
| ENSSSCG00050011569 | sus_scrofa_bamei | ENSSSCP00050006418 | 98.8564 | 98.6658 | ovis_aries_rambouillet | ENSOARP00020031568 | 98.9822 | 98.7914 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
