| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00050007986 | Gene ID |
|
Accession |
- |
| Symbol |
CHD3 |
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
24774 bases |
Strand |
Plus strand |
| Position |
LUXV01003472.1 : 924489 - 949262 |
RNA binding domain |
ResIII |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00050004875 |
ResIII |
PF04851 |
2.6e-08 |
1 |
| ENSSSCP00050004919 |
ResIII |
PF04851 |
2.6e-08 |
1 |
| ENSSSCP00050004884 |
ResIII |
PF04851 |
3e-08 |
1 |
| ENSSSCP00050004901 |
ResIII |
PF04851 |
3.2e-08 |
1 |
| ENSSSCP00050004909 |
ResIII |
PF04851 |
3.5e-08 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| CHD3-201 |
ENSSSCT00050011502 |
8401 |
1709aa |
ENSSSCP00050004875 |
| CHD3-202 |
ENSSSCT00050011541 |
7238 |
1834aa |
ENSSSCP00050004884 |
| CHD3-203 |
ENSSSCT00050011606 |
7153 |
1999aa |
ENSSSCP00050004901 |
| CHD3-204 |
ENSSSCT00050011624 |
8155 |
1736aa |
ENSSSCP00050004909 |
| CHD3-205 |
ENSSSCT00050011647 |
7729 |
1711aa |
ENSSSCP00050004919 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050038642 | 38.3041 | 23.9766 | sus_scrofa_bamei | ENSSSCP00050004901 | 19.6598 | 12.3062 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050022664 | 20.2697 | 10.3392 | sus_scrofa_bamei | ENSSSCP00050004901 | 24.8124 | 12.6563 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050037361 | 30.6964 | 18.1204 | sus_scrofa_bamei | ENSSSCP00050004901 | 22.7114 | 13.4067 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050007050 | 26.7857 | 15.2778 | sus_scrofa_bamei | ENSSSCP00050004901 | 13.5068 | 7.70385 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050029062 | 30.7317 | 19.1463 | sus_scrofa_bamei | ENSSSCP00050004901 | 25.2126 | 15.7079 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050011902 | 45.4279 | 28.3118 | sus_scrofa_bamei | ENSSSCP00050004901 | 38.7694 | 24.1621 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050011183 | 26.0402 | 16.3662 | sus_scrofa_bamei | ENSSSCP00050004901 | 37.5688 | 23.6118 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050043546 | 30.8901 | 16.6492 | sus_scrofa_bamei | ENSSSCP00050004901 | 14.7574 | 7.95398 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050001511 | 38.5542 | 22.0884 | sus_scrofa_bamei | ENSSSCP00050004901 | 14.4072 | 8.25413 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050032120 | 28.672 | 15.996 | sus_scrofa_bamei | ENSSSCP00050004901 | 14.2571 | 7.95398 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050039151 | 31.9968 | 18.6047 | sus_scrofa_bamei | ENSSSCP00050004901 | 19.96 | 11.6058 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050025090 | 42.8991 | 26.9366 | sus_scrofa_bamei | ENSSSCP00050004901 | 36.5683 | 22.9615 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050042537 | 25.311 | 13.3045 | sus_scrofa_bamei | ENSSSCP00050004901 | 23.4117 | 12.3062 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050007026 | 47.1254 | 30.2545 | sus_scrofa_bamei | ENSSSCP00050004901 | 25.0125 | 16.058 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050013051 | 39.726 | 25.4186 | sus_scrofa_bamei | ENSSSCP00050004901 | 13.0565 | 8.35418 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050003684 | 27.5434 | 15.5087 | sus_scrofa_bamei | ENSSSCP00050004901 | 22.2111 | 12.5063 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050025882 | 25.947 | 16.527 | sus_scrofa_bamei | ENSSSCP00050004901 | 38.7194 | 24.6623 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050002495 | 29.9747 | 19.8988 | sus_scrofa_bamei | ENSSSCP00050004901 | 35.5678 | 23.6118 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050046328 | 46.2366 | 28.7933 | sus_scrofa_bamei | ENSSSCP00050004901 | 19.3597 | 12.056 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050045436 | 78.1266 | 68.5023 | sus_scrofa_bamei | ENSSSCP00050004901 | 75.938 | 66.5833 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050003482 | 48.5017 | 31.9645 | sus_scrofa_bamei | ENSSSCP00050004901 | 21.8609 | 14.4072 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050047064 | 18.2996 | 11.378 | sus_scrofa_bamei | ENSSSCP00050004901 | 28.9645 | 18.009 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050024954 | 36.1842 | 21.9079 | sus_scrofa_bamei | ENSSSCP00050004901 | 27.5138 | 16.6583 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050006418 | 31.7662 | 19.1233 | sus_scrofa_bamei | ENSSSCP00050004901 | 25.0125 | 15.0575 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050020261 | 28.3019 | 15.0943 | sus_scrofa_bamei | ENSSSCP00050004901 | 16.5083 | 8.8044 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050044371 | 16.0575 | 8.90347 | sus_scrofa_bamei | ENSSSCP00050004901 | 25.7129 | 14.2571 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050036033 | 79.7436 | 69.3846 | sus_scrofa_bamei | ENSSSCP00050004901 | 77.7889 | 67.6838 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050044067 | 17.1107 | 9.11782 | sus_scrofa_bamei | ENSSSCP00050004901 | 14.4572 | 7.70385 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050023778 | 46.5603 | 30.3091 | sus_scrofa_bamei | ENSSSCP00050004901 | 23.3617 | 15.2076 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050009578 | 26.5539 | 17.4329 | sus_scrofa_bamei | ENSSSCP00050004901 | 36.1181 | 23.7119 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050004901 | 97.8989 | 97.8489 | sus_scrofa_usmarc | ENSSSCP00070037250 | 99.1388 | 99.0881 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050004901 | 99.7999 | 99.7999 | sus_scrofa | ENSSSCP00000055609 | 99.9499 | 99.9499 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050004901 | 99.7999 | 99.7999 | sus_scrofa_largewhite | ENSSSCP00025026721 | 99.9499 | 99.9499 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050004901 | 97.6989 | 96.7984 | equus_caballus | ENSECAP00000008810 | 98.0914 | 97.1873 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050004901 | 96.4983 | 95.5978 | bos_taurus | ENSBTAP00000064494 | 93.5499 | 92.677 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050004901 | 94.8974 | 94.8474 | sus_scrofa_wuzhishan | ENSSSCP00005038014 | 94.8026 | 94.7526 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050004901 | 100 | 99.95 | sus_scrofa_jinhua | ENSSSCP00060035296 | 100 | 99.95 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050004901 | 99.7999 | 99.7999 | sus_scrofa_landrace | ENSSSCP00045045535 | 99.9499 | 99.9499 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050004901 | 99.7999 | 99.7499 | sus_scrofa_tibetan | ENSSSCP00015015245 | 99.75 | 99.7 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050004901 | 99.7999 | 99.7999 | sus_scrofa_pietrain | ENSSSCP00055029661 | 99.9499 | 99.9499 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050004901 | 99.7999 | 99.7999 | sus_scrofa_hampshire | ENSSSCP00035026071 | 99.9499 | 99.9499 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050004901 | 96.6483 | 96.5483 | sus_scrofa_berkshire | ENSSSCP00065035997 | 98.6721 | 98.57 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050004901 | 100 | 100 | sus_scrofa_meishan | ENSSSCP00040007952 | 100 | 100 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050004901 | 100 | 99.95 | sus_scrofa_rongchang | ENSSSCP00030048333 | 100 | 99.95 |
| ENSSSCG00050007986 | sus_scrofa_bamei | ENSSSCP00050004901 | 97.8489 | 97.0485 | ovis_aries_rambouillet | ENSOARP00020030748 | 94.9515 | 94.1748 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
