| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00050006219 | Gene ID |
|
Accession |
- |
| Symbol |
EIF4A1 |
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
5825 bases |
Strand |
Plus strand |
| Position |
LUXV01003472.1 : 655063 - 660887 |
RNA binding domain |
ResIII , DEAD |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00050003689 |
ResIII |
PF04851 |
6.2e-07 |
1 |
| ENSSSCP00050003689 |
DEAD |
PF00270 |
3.7e-44 |
2 |
| ENSSSCP00050003682 |
ResIII |
PF04851 |
7e-07 |
1 |
| ENSSSCP00050003682 |
DEAD |
PF00270 |
4.1e-44 |
2 |
| ENSSSCP00050003662 |
ResIII |
PF04851 |
9.6e-07 |
1 |
| ENSSSCP00050003662 |
DEAD |
PF00270 |
5.1e-44 |
2 |
| ENSSSCP00050003660 |
ResIII |
PF04851 |
1e-06 |
1 |
| ENSSSCP00050003660 |
DEAD |
PF00270 |
5.6e-44 |
2 |
| ENSSSCP00050003671 |
DEAD |
PF00270 |
1.4e-27 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| EIF4A1-201 |
ENSSSCT00050008514 |
1804 |
406aa |
ENSSSCP00050003660 |
| EIF4A1-202 |
ENSSSCT00050008523 |
2008 |
390aa |
ENSSSCP00050003662 |
| EIF4A1-203 |
ENSSSCT00050008547 |
2154 |
214aa |
ENSSSCP00050003671 |
| EIF4A1-205 |
ENSSSCT00050008573 |
2034 |
340aa |
ENSSSCP00050003682 |
| EIF4A1-204 |
ENSSSCT00050008582 |
945 |
314aa |
ENSSSCP00050003689 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050024104 | 39.1481 | 23.1237 | sus_scrofa_bamei | ENSSSCP00050003660 | 47.5369 | 28.0788 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050007664 | 28.4404 | 16.3827 | sus_scrofa_bamei | ENSSSCP00050003660 | 53.4483 | 30.7882 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050034353 | 26.3221 | 16.3462 | sus_scrofa_bamei | ENSSSCP00050003660 | 53.9409 | 33.4975 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050044756 | 11.7331 | 5.59816 | sus_scrofa_bamei | ENSSSCP00050003660 | 37.6847 | 17.9803 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050025634 | 27.1605 | 14.1289 | sus_scrofa_bamei | ENSSSCP00050003660 | 48.7685 | 25.3695 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050046457 | 30.6122 | 19.5578 | sus_scrofa_bamei | ENSSSCP00050003660 | 44.335 | 28.3251 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050024585 | 31.1042 | 18.196 | sus_scrofa_bamei | ENSSSCP00050003660 | 49.2611 | 28.8177 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050008959 | 25.811 | 15.6559 | sus_scrofa_bamei | ENSSSCP00050003660 | 45.0739 | 27.3399 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050031340 | 22.8972 | 12.1495 | sus_scrofa_bamei | ENSSSCP00050003660 | 48.2759 | 25.6158 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050032356 | 34.2593 | 19.8148 | sus_scrofa_bamei | ENSSSCP00050003660 | 45.5665 | 26.3547 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050015036 | 25.6378 | 14.6684 | sus_scrofa_bamei | ENSSSCP00050003660 | 49.5074 | 28.3251 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050036308 | 46.3768 | 31.0559 | sus_scrofa_bamei | ENSSSCP00050003660 | 55.1724 | 36.9458 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050017955 | 22.4118 | 13.1968 | sus_scrofa_bamei | ENSSSCP00050003660 | 48.5222 | 28.5714 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050001822 | 30.6321 | 18.9627 | sus_scrofa_bamei | ENSSSCP00050003660 | 46.5517 | 28.8177 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050024602 | 94.6341 | 88.7805 | sus_scrofa_bamei | ENSSSCP00050003660 | 95.5665 | 89.6552 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050046876 | 19.6515 | 12.2943 | sus_scrofa_bamei | ENSSSCP00050003660 | 50 | 31.2808 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050007160 | 30.9524 | 17.4603 | sus_scrofa_bamei | ENSSSCP00050003660 | 48.0296 | 27.0936 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050044106 | 44.1341 | 27.933 | sus_scrofa_bamei | ENSSSCP00050003660 | 58.3744 | 36.9458 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050031023 | 26.0814 | 14.7583 | sus_scrofa_bamei | ENSSSCP00050003660 | 50.4926 | 28.5714 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050038257 | 21.7788 | 12.3147 | sus_scrofa_bamei | ENSSSCP00050003660 | 47.0443 | 26.601 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050039285 | 28.9091 | 16.3636 | sus_scrofa_bamei | ENSSSCP00050003660 | 39.1626 | 22.1675 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050012155 | 33.9374 | 18.7809 | sus_scrofa_bamei | ENSSSCP00050003660 | 50.7389 | 28.0788 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050036116 | 26.2195 | 15.3659 | sus_scrofa_bamei | ENSSSCP00050003660 | 52.9557 | 31.0345 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050015443 | 27.9133 | 16.2602 | sus_scrofa_bamei | ENSSSCP00050003660 | 50.7389 | 29.5567 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050042388 | 19.5537 | 11.5834 | sus_scrofa_bamei | ENSSSCP00050003660 | 45.3202 | 26.8473 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050021228 | 44.4223 | 27.49 | sus_scrofa_bamei | ENSSSCP00050003660 | 54.9261 | 33.9901 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050044432 | 33.0551 | 20.0334 | sus_scrofa_bamei | ENSSSCP00050003660 | 48.7685 | 29.5567 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050037303 | 37.6812 | 24.0166 | sus_scrofa_bamei | ENSSSCP00050003660 | 44.8276 | 28.5714 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050021843 | 34.0659 | 19.7802 | sus_scrofa_bamei | ENSSSCP00050003660 | 45.8128 | 26.601 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050027364 | 46.1698 | 27.7433 | sus_scrofa_bamei | ENSSSCP00050003660 | 54.9261 | 33.0049 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050023456 | 31.2689 | 18.7311 | sus_scrofa_bamei | ENSSSCP00050003660 | 50.9852 | 30.5419 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050021345 | 81.0219 | 66.4234 | sus_scrofa_bamei | ENSSSCP00050003660 | 82.0197 | 67.2414 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050035004 | 27.1505 | 14.9194 | sus_scrofa_bamei | ENSSSCP00050003660 | 49.7537 | 27.3399 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050044456 | 22.2556 | 12.4812 | sus_scrofa_bamei | ENSSSCP00050003660 | 36.4532 | 20.4433 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050029299 | 31.4729 | 18.9147 | sus_scrofa_bamei | ENSSSCP00050003660 | 50 | 30.0493 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050003336 | 44.8207 | 28.0877 | sus_scrofa_bamei | ENSSSCP00050003660 | 55.4187 | 34.7291 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050003660 | 98.5222 | 98.2759 | sus_scrofa_usmarc | ENSSSCP00070036353 | 97.561 | 97.3171 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050003660 | 98.5222 | 98.2759 | sus_scrofa | ENSSSCP00000063393 | 97.561 | 97.3171 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050003660 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025041248 | 100 | 100 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050003660 | 98.7685 | 98.7685 | equus_caballus | ENSECAP00000019298 | 98.2843 | 98.2843 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050003660 | 100 | 100 | bos_taurus | ENSBTAP00000000144 | 100 | 100 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050003660 | 97.0443 | 96.5517 | sus_scrofa_wuzhishan | ENSSSCP00005042938 | 97.0443 | 96.5517 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050003660 | 100 | 100 | sus_scrofa_jinhua | ENSSSCP00060030466 | 100 | 100 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050003660 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045039304 | 100 | 100 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050003660 | 100 | 100 | sus_scrofa_tibetan | ENSSSCP00015021492 | 100 | 100 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050003660 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055022451 | 100 | 100 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050003660 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035028635 | 100 | 100 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050003660 | 95.0739 | 93.8424 | sus_scrofa_berkshire | ENSSSCP00065032052 | 91.0377 | 89.8585 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050003660 | 100 | 100 | sus_scrofa_meishan | ENSSSCP00040009966 | 100 | 100 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050003660 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030048779 | 100 | 100 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050003660 | 100 | 100 | ovis_aries_rambouillet | ENSOARP00020016306 | 100 | 100 |
| ENSSSCG00050006219 | sus_scrofa_bamei | ENSSSCP00050003660 | 92.3645 | 91.133 | ovis_aries_rambouillet | ENSOARP00020002708 | 94.2211 | 92.9648 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
