Description

Ensembl ID ENSSSCG00050006029 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 130437 bases Strand Minus strand
Position LUXV01011455.1 : 723107 - 853543 RNA binding domain ResIII
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00050003482 ResIII PF04851 1.7e-10 1
ENSSSCP00050003493 ResIII PF04851 1.2e-07 1
ENSSSCP00050003486 ResIII PF04851 1.3e-07 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00050008189 5248 901aa ENSSSCP00050003482
- ENSSSCT00050008195 6345 827aa ENSSSCP00050003486
- ENSSSCT00050008203 2925 831aa ENSSSCP00050003493

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005003864227.777818.7134sus_scrofa_bameiENSSSCP0005000348231.631521.3097
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005002266412.30086.66122sus_scrofa_bameiENSSSCP0005000348233.407318.091
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005003736122.785714.5368sus_scrofa_bameiENSSSCP0005000348237.402923.8624
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005000705023.214314.4841sus_scrofa_bameiENSSSCP0005000348225.971116.2042
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005002906221.585414.6951sus_scrofa_bameiENSSSCP0005000348239.289726.7481
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005001190223.85716.2954sus_scrofa_bameiENSSSCP0005000348245.17230.8546
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005001118314.52849.18863sus_scrofa_bameiENSSSCP0005000348246.503929.4118
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005004354623.350812.7749sus_scrofa_bameiENSSSCP0005000348224.750313.5405
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005000151135.609119.9465sus_scrofa_bameiENSSSCP0005000348229.522816.5372
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005003212026.056314.6881sus_scrofa_bameiENSSSCP0005000348228.745816.2042
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005003915125.260615.5573sus_scrofa_bameiENSSSCP0005000348234.961221.5316
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005002509023.532916.1972sus_scrofa_bameiENSSSCP0005000348244.506130.6326
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005004253715.52199.46458sus_scrofa_bameiENSSSCP0005000348231.853519.4229
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005000702635.909524.1282sus_scrofa_bameiENSSSCP0005000348242.286428.4129
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005001305133.7923.2877sus_scrofa_bameiENSSSCP0005000348224.639316.9811
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005000368418.176210.8561sus_scrofa_bameiENSSSCP0005000348232.519419.4229
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005002588214.38159.31948sus_scrofa_bameiENSSSCP0005000348247.613830.8546
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005000249517.327211.5093sus_scrofa_bameiENSSSCP0005000348245.61630.2997
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005004632838.709726.6428sus_scrofa_bameiENSSSCP0005000348235.9624.7503
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005004543621.71914.4107sus_scrofa_bameiENSSSCP0005000348246.836831.0766
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005004706412.76868.28066sus_scrofa_bameiENSSSCP0005000348244.839129.0788
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005002495423.355315.3289sus_scrofa_bameiENSSSCP0005000348239.400725.8602
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005000641822.490515.3113sus_scrofa_bameiENSSSCP0005000348239.289726.7481
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005000490121.860914.4072sus_scrofa_bameiENSSSCP0005000348248.501731.9645
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005002026119.811311.235sus_scrofa_bameiENSSSCP0005000348225.638214.5394
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005004437111.37146.18557sus_scrofa_bameiENSSSCP0005000348240.399621.9756
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005003603322.512814.5641sus_scrofa_bameiENSSSCP0005000348248.723631.5205
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005004406713.26237.34162sus_scrofa_bameiENSSSCP0005000348224.861313.7625
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005002377836.689925.0249sus_scrofa_bameiENSSSCP0005000348240.843527.8579
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005000957815.41019.9669sus_scrofa_bameiENSSSCP0005000348246.503930.0777

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005000348210099.889sus_scrofa_usmarcENSSSCP0007000351010099.889
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005000348210099.778sus_scrofaENSSSCP0000000714510099.778
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005000348296.892396.7814sus_scrofa_largewhiteENSSSCP0002503498610099.8855
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005000348293.895789.7891equus_caballusENSECAP0000002504791.558487.5541
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005000348295.227591.121bos_taurusENSBTAP0000002776295.652291.5273
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005000348210099.778sus_scrofa_wuzhishanENSSSCP0000500653510099.778
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005000348210099.889sus_scrofa_jinhuaENSSSCP0006001876110099.889
ENSSSCG00050006029sus_scrofa_bameiENSSSCP00050003482100100sus_scrofa_landraceENSSSCP00045029329100100
ENSSSCG00050006029sus_scrofa_bameiENSSSCP00050003482100100sus_scrofa_tibetanENSSSCP00015025660100100
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005000348210099.889sus_scrofa_pietrainENSSSCP0005504735210099.889
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005000348210099.889sus_scrofa_hampshireENSSSCP0003504420410099.889
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005000348210099.778sus_scrofa_berkshireENSSSCP0006500176510099.778
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005000348299.88999.778sus_scrofa_meishanENSSSCP0004002599699.88999.778
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005000348299.445199.2231sus_scrofa_rongchangENSSSCP0003004756299.666399.4438
ENSSSCG00050006029sus_scrofa_bameiENSSSCP0005000348294.228689.6781ovis_aries_rambouilletENSOARP0002000362795.072890.4815

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression