| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00050005792 | Gene ID |
|
Accession |
- |
| Symbol |
BAT1 |
Alias |
- |
Full Name |
Spliceosome RNA helicase DDX39B |
| Status |
Confidence |
Length |
14473 bases |
Strand |
Minus strand |
| Position |
LUXV01002871.1 : 610502 - 624974 |
RNA binding domain |
ResIII , DEAD |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00050003338 |
ResIII |
PF04851 |
1.8e-07 |
1 |
| ENSSSCP00050003338 |
DEAD |
PF00270 |
9.2e-39 |
2 |
| ENSSSCP00050003344 |
ResIII |
PF04851 |
2.1e-07 |
1 |
| ENSSSCP00050003344 |
DEAD |
PF00270 |
1.1e-38 |
2 |
| ENSSSCP00050003330 |
ResIII |
PF04851 |
2.7e-07 |
1 |
| ENSSSCP00050003330 |
DEAD |
PF00270 |
1.4e-38 |
2 |
| ENSSSCP00050003336 |
ResIII |
PF04851 |
3e-07 |
1 |
| ENSSSCP00050003336 |
DEAD |
PF00270 |
1.6e-38 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| BAT1-202 |
ENSSSCT00050007866 |
5207 |
471aa |
ENSSSCP00050003330 |
| BAT1-201 |
ENSSSCT00050007875 |
5300 |
502aa |
ENSSSCP00050003336 |
| BAT1-203 |
ENSSSCT00050007881 |
2969 |
397aa |
ENSSSCP00050003338 |
| BAT1-204 |
ENSSSCT00050007892 |
1792 |
428aa |
ENSSSCP00050003344 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050024104 | 42.7992 | 26.3692 | sus_scrofa_bamei | ENSSSCP00050003336 | 42.0319 | 25.8964 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050007664 | 28.8336 | 16.3827 | sus_scrofa_bamei | ENSSSCP00050003336 | 43.8247 | 24.9004 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050034353 | 25.601 | 16.9471 | sus_scrofa_bamei | ENSSSCP00050003336 | 42.4303 | 28.0877 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050044756 | 13.3436 | 6.97853 | sus_scrofa_bamei | ENSSSCP00050003336 | 34.6614 | 18.1275 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050025634 | 25.3772 | 13.0316 | sus_scrofa_bamei | ENSSSCP00050003336 | 36.8526 | 18.9243 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050046457 | 31.6327 | 17.8571 | sus_scrofa_bamei | ENSSSCP00050003336 | 37.0518 | 20.9163 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050024585 | 32.5039 | 17.2628 | sus_scrofa_bamei | ENSSSCP00050003336 | 41.6335 | 22.1116 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050008959 | 23.9774 | 13.2581 | sus_scrofa_bamei | ENSSSCP00050003336 | 33.8645 | 18.7251 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050031340 | 24.4159 | 12.7336 | sus_scrofa_bamei | ENSSSCP00050003336 | 41.6335 | 21.7131 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050032356 | 33.7037 | 19.0741 | sus_scrofa_bamei | ENSSSCP00050003336 | 36.255 | 20.5179 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050015036 | 26.148 | 13.9031 | sus_scrofa_bamei | ENSSSCP00050003336 | 40.8367 | 21.7131 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050036308 | 42.6501 | 24.0166 | sus_scrofa_bamei | ENSSSCP00050003336 | 41.0359 | 23.1076 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050017955 | 21.6155 | 12.0592 | sus_scrofa_bamei | ENSSSCP00050003336 | 37.8486 | 21.1155 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050001822 | 30.9562 | 17.5041 | sus_scrofa_bamei | ENSSSCP00050003336 | 38.0478 | 21.5139 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050024602 | 55.3659 | 35.6098 | sus_scrofa_bamei | ENSSSCP00050003336 | 45.2191 | 29.0837 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050046876 | 21.2004 | 11.2294 | sus_scrofa_bamei | ENSSSCP00050003336 | 43.6255 | 23.1076 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050007160 | 33.1746 | 17.9365 | sus_scrofa_bamei | ENSSSCP00050003336 | 41.6335 | 22.51 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050044106 | 40.7821 | 24.3948 | sus_scrofa_bamei | ENSSSCP00050003336 | 43.6255 | 26.0956 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050031023 | 27.4809 | 14.7583 | sus_scrofa_bamei | ENSSSCP00050003336 | 43.0279 | 23.1076 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050038257 | 21.7788 | 11.0604 | sus_scrofa_bamei | ENSSSCP00050003336 | 38.0478 | 19.3227 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050039285 | 28 | 15.4545 | sus_scrofa_bamei | ENSSSCP00050003336 | 30.6773 | 16.9323 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050012155 | 35.7496 | 19.2751 | sus_scrofa_bamei | ENSSSCP00050003336 | 43.2271 | 23.3068 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050036116 | 27.9268 | 15.8537 | sus_scrofa_bamei | ENSSSCP00050003336 | 45.6175 | 25.8964 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050015443 | 27.7778 | 13.9566 | sus_scrofa_bamei | ENSSSCP00050003336 | 40.8367 | 20.5179 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050042388 | 21.1477 | 12.7524 | sus_scrofa_bamei | ENSSSCP00050003336 | 39.6414 | 23.9044 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050021228 | 81.6733 | 77.49 | sus_scrofa_bamei | ENSSSCP00050003336 | 81.6733 | 77.49 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050044432 | 33.389 | 18.5309 | sus_scrofa_bamei | ENSSSCP00050003336 | 39.8406 | 22.1116 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050037303 | 40.3727 | 24.0166 | sus_scrofa_bamei | ENSSSCP00050003336 | 38.8446 | 23.1076 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050021843 | 32.7839 | 17.9487 | sus_scrofa_bamei | ENSSSCP00050003336 | 35.6574 | 19.5219 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050027364 | 45.3416 | 27.9503 | sus_scrofa_bamei | ENSSSCP00050003336 | 43.6255 | 26.8924 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050023456 | 31.1178 | 18.5801 | sus_scrofa_bamei | ENSSSCP00050003336 | 41.0359 | 24.502 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050021345 | 56.2044 | 34.7932 | sus_scrofa_bamei | ENSSSCP00050003336 | 46.0159 | 28.4861 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050035004 | 27.1505 | 15.0538 | sus_scrofa_bamei | ENSSSCP00050003336 | 40.239 | 22.3108 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050003660 | 55.4187 | 34.7291 | sus_scrofa_bamei | ENSSSCP00050003336 | 44.8207 | 28.0877 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050044456 | 24.9624 | 12.4812 | sus_scrofa_bamei | ENSSSCP00050003336 | 33.0677 | 16.5339 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050029299 | 33.3333 | 17.9845 | sus_scrofa_bamei | ENSSSCP00050003336 | 42.8287 | 23.1076 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050003336 | 94.0239 | 93.6255 | sus_scrofa_usmarc | ENSSSCP00070040707 | 96.7213 | 96.3115 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050003336 | 93.6255 | 93.6255 | sus_scrofa | ENSSSCP00000031099 | 100 | 100 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050003336 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025048978 | 100 | 100 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050003336 | 85.0598 | 84.6614 | equus_caballus | ENSECAP00000052685 | 95.3125 | 94.8661 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050003336 | 85.259 | 85.0598 | bos_taurus | ENSBTAP00000067484 | 100 | 99.7664 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050003336 | 100 | 100 | sus_scrofa_wuzhishan | ENSSSCP00005031441 | 100 | 100 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050003336 | 97.6096 | 97.6096 | sus_scrofa_jinhua | ENSSSCP00060024581 | 100 | 100 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050003336 | 85.259 | 85.259 | sus_scrofa_landrace | ENSSSCP00045046942 | 100 | 100 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050003336 | 94.6215 | 93.8247 | sus_scrofa_tibetan | ENSSSCP00015030225 | 93.5039 | 92.7165 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050003336 | 85.259 | 85.259 | sus_scrofa_pietrain | ENSSSCP00055046173 | 100 | 100 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050003336 | 85.259 | 85.259 | sus_scrofa_hampshire | ENSSSCP00035010754 | 100 | 100 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050003336 | 93.4263 | 93.4263 | sus_scrofa_berkshire | ENSSSCP00065013935 | 99.5754 | 99.5754 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050003336 | 85.259 | 85.259 | sus_scrofa_meishan | ENSSSCP00040043904 | 100 | 100 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050003336 | 94.6215 | 93.8247 | sus_scrofa_rongchang | ENSSSCP00030042564 | 93.5039 | 92.7165 |
| ENSSSCG00050005792 | sus_scrofa_bamei | ENSSSCP00050003336 | 85.259 | 85.0598 | ovis_aries_rambouillet | ENSOARP00020020927 | 100 | 99.7664 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
