Description

Ensembl ID ENSSSCG00050005011 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 17026 bases Strand Plus strand
Position LUXV01002871.1 : 354975 - 372000 RNA binding domain tRNA-synt_1g , tRNA-synt_1 , Anticodon_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00050002973 tRNA-synt_1g PF09334 3.6e-14 1
ENSSSCP00050002973 tRNA-synt_1 PF00133 1.4e-161 2
ENSSSCP00050002973 tRNA-synt_1 PF00133 1.4e-161 3
ENSSSCP00050002973 Anticodon_1 PF08264 3.1e-31 4
ENSSSCP00050002972 tRNA-synt_1g PF09334 4e-14 1
ENSSSCP00050002972 tRNA-synt_1 PF00133 1.5e-181 2
ENSSSCP00050002972 Anticodon_1 PF08264 3.3e-31 3
ENSSSCP00050002974 tRNA-synt_1g PF09334 8.8e-12 1
ENSSSCP00050002974 tRNA-synt_1 PF00133 4.4e-162 2
ENSSSCP00050002974 Anticodon_1 PF08264 3.1e-31 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00050006885 5543 1062aa ENSSSCP00050002972
- ENSSSCT00050006888 3456 1028aa ENSSSCP00050002973
- ENSSSCT00050006891 3391 1027aa ENSSSCP00050002974

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00050005011sus_scrofa_bameiENSSSCP0005000683754.308341.8972sus_scrofa_bameiENSSSCP0005000297264.689349.9058
ENSSSCG00050005011sus_scrofa_bameiENSSSCP0005003737132.483417.8492sus_scrofa_bameiENSSSCP0005000297227.589515.1601
ENSSSCG00050005011sus_scrofa_bameiENSSSCP0005000627726.018811.9122sus_scrofa_bameiENSSSCP0005000297223.446310.7345
ENSSSCG00050005011sus_scrofa_bameiENSSSCP0005001782224.574211.5166sus_scrofa_bameiENSSSCP0005000297228.531113.371
ENSSSCG00050005011sus_scrofa_bameiENSSSCP0005003119722.979412.5198sus_scrofa_bameiENSSSCP0005000297227.30714.8776
ENSSSCG00050005011sus_scrofa_bameiENSSSCP0005000215334.511820.5387sus_scrofa_bameiENSSSCP0005000297219.303211.4878
ENSSSCG00050005011sus_scrofa_bameiENSSSCP0005003511834.189720.4545sus_scrofa_bameiENSSSCP0005000297232.5819.4915

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00050005011sus_scrofa_bameiENSSSCP0005000297210099.9058sus_scrofa_usmarcENSSSCP0007004135710099.9058
ENSSSCG00050005011sus_scrofa_bameiENSSSCP0005000297299.905899.8117sus_scrofaENSSSCP0000000146499.905899.8117
ENSSSCG00050005011sus_scrofa_bameiENSSSCP0005000297299.623499.435sus_scrofa_largewhiteENSSSCP0002504900599.623499.435
ENSSSCG00050005011sus_scrofa_bameiENSSSCP0005000297294.067890.5838equus_caballusENSECAP0000001697688.721185.4352
ENSSSCG00050005011sus_scrofa_bameiENSSSCP0005000297295.009491.9021bos_taurusENSBTAP0000001416094.741891.6432
ENSSSCG00050005011sus_scrofa_bameiENSSSCP0005000297299.905899.8117sus_scrofa_wuzhishanENSSSCP0000503053399.905899.8117
ENSSSCG00050005011sus_scrofa_bameiENSSSCP0005000297299.623499.5292sus_scrofa_jinhuaENSSSCP0006002513199.623499.5292
ENSSSCG00050005011sus_scrofa_bameiENSSSCP0005000297299.905899.8117sus_scrofa_landraceENSSSCP0004504821699.905899.8117
ENSSSCG00050005011sus_scrofa_bameiENSSSCP0005000297299.811799.7175sus_scrofa_tibetanENSSSCP0001502392499.811799.7175
ENSSSCG00050005011sus_scrofa_bameiENSSSCP0005000297299.811799.6234sus_scrofa_pietrainENSSSCP0005504835399.811799.6234
ENSSSCG00050005011sus_scrofa_bameiENSSSCP0005000297299.905899.8117sus_scrofa_hampshireENSSSCP0003501498399.905899.8117
ENSSSCG00050005011sus_scrofa_bameiENSSSCP0005000297299.811799.7175sus_scrofa_berkshireENSSSCP0006500861199.811799.7175
ENSSSCG00050005011sus_scrofa_bameiENSSSCP0005000297299.905899.8117sus_scrofa_meishanENSSSCP0004004704699.905899.8117
ENSSSCG00050005011sus_scrofa_bameiENSSSCP0005000297299.905899.8117sus_scrofa_rongchangENSSSCP0003004460999.905899.8117
ENSSSCG00050005011sus_scrofa_bameiENSSSCP0005000297294.915391.7137ovis_aries_rambouilletENSOARP0002002480894.647991.4554

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression