RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00050005011 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
17026 bases |
Strand |
Plus strand |
Position |
LUXV01002871.1 : 354975 - 372000 |
RNA binding domain |
tRNA-synt_1g , tRNA-synt_1 , Anticodon_1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00050002973 |
tRNA-synt_1g |
PF09334 |
3.6e-14 |
1 |
ENSSSCP00050002973 |
tRNA-synt_1 |
PF00133 |
1.4e-161 |
2 |
ENSSSCP00050002973 |
tRNA-synt_1 |
PF00133 |
1.4e-161 |
3 |
ENSSSCP00050002973 |
Anticodon_1 |
PF08264 |
3.1e-31 |
4 |
ENSSSCP00050002972 |
tRNA-synt_1g |
PF09334 |
4e-14 |
1 |
ENSSSCP00050002972 |
tRNA-synt_1 |
PF00133 |
1.5e-181 |
2 |
ENSSSCP00050002972 |
Anticodon_1 |
PF08264 |
3.3e-31 |
3 |
ENSSSCP00050002974 |
tRNA-synt_1g |
PF09334 |
8.8e-12 |
1 |
ENSSSCP00050002974 |
tRNA-synt_1 |
PF00133 |
4.4e-162 |
2 |
ENSSSCP00050002974 |
Anticodon_1 |
PF08264 |
3.1e-31 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00050006885 |
5543 |
1062aa |
ENSSSCP00050002972 |
- |
ENSSSCT00050006888 |
3456 |
1028aa |
ENSSSCP00050002973 |
- |
ENSSSCT00050006891 |
3391 |
1027aa |
ENSSSCP00050002974 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00050005011 | sus_scrofa_bamei | ENSSSCP00050006837 | 54.3083 | 41.8972 | sus_scrofa_bamei | ENSSSCP00050002972 | 64.6893 | 49.9058 |
ENSSSCG00050005011 | sus_scrofa_bamei | ENSSSCP00050037371 | 32.4834 | 17.8492 | sus_scrofa_bamei | ENSSSCP00050002972 | 27.5895 | 15.1601 |
ENSSSCG00050005011 | sus_scrofa_bamei | ENSSSCP00050006277 | 26.0188 | 11.9122 | sus_scrofa_bamei | ENSSSCP00050002972 | 23.4463 | 10.7345 |
ENSSSCG00050005011 | sus_scrofa_bamei | ENSSSCP00050017822 | 24.5742 | 11.5166 | sus_scrofa_bamei | ENSSSCP00050002972 | 28.5311 | 13.371 |
ENSSSCG00050005011 | sus_scrofa_bamei | ENSSSCP00050031197 | 22.9794 | 12.5198 | sus_scrofa_bamei | ENSSSCP00050002972 | 27.307 | 14.8776 |
ENSSSCG00050005011 | sus_scrofa_bamei | ENSSSCP00050002153 | 34.5118 | 20.5387 | sus_scrofa_bamei | ENSSSCP00050002972 | 19.3032 | 11.4878 |
ENSSSCG00050005011 | sus_scrofa_bamei | ENSSSCP00050035118 | 34.1897 | 20.4545 | sus_scrofa_bamei | ENSSSCP00050002972 | 32.58 | 19.4915 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00050005011 | sus_scrofa_bamei | ENSSSCP00050002972 | 100 | 99.9058 | sus_scrofa_usmarc | ENSSSCP00070041357 | 100 | 99.9058 |
ENSSSCG00050005011 | sus_scrofa_bamei | ENSSSCP00050002972 | 99.9058 | 99.8117 | sus_scrofa | ENSSSCP00000001464 | 99.9058 | 99.8117 |
ENSSSCG00050005011 | sus_scrofa_bamei | ENSSSCP00050002972 | 99.6234 | 99.435 | sus_scrofa_largewhite | ENSSSCP00025049005 | 99.6234 | 99.435 |
ENSSSCG00050005011 | sus_scrofa_bamei | ENSSSCP00050002972 | 94.0678 | 90.5838 | equus_caballus | ENSECAP00000016976 | 88.7211 | 85.4352 |
ENSSSCG00050005011 | sus_scrofa_bamei | ENSSSCP00050002972 | 95.0094 | 91.9021 | bos_taurus | ENSBTAP00000014160 | 94.7418 | 91.6432 |
ENSSSCG00050005011 | sus_scrofa_bamei | ENSSSCP00050002972 | 99.9058 | 99.8117 | sus_scrofa_wuzhishan | ENSSSCP00005030533 | 99.9058 | 99.8117 |
ENSSSCG00050005011 | sus_scrofa_bamei | ENSSSCP00050002972 | 99.6234 | 99.5292 | sus_scrofa_jinhua | ENSSSCP00060025131 | 99.6234 | 99.5292 |
ENSSSCG00050005011 | sus_scrofa_bamei | ENSSSCP00050002972 | 99.9058 | 99.8117 | sus_scrofa_landrace | ENSSSCP00045048216 | 99.9058 | 99.8117 |
ENSSSCG00050005011 | sus_scrofa_bamei | ENSSSCP00050002972 | 99.8117 | 99.7175 | sus_scrofa_tibetan | ENSSSCP00015023924 | 99.8117 | 99.7175 |
ENSSSCG00050005011 | sus_scrofa_bamei | ENSSSCP00050002972 | 99.8117 | 99.6234 | sus_scrofa_pietrain | ENSSSCP00055048353 | 99.8117 | 99.6234 |
ENSSSCG00050005011 | sus_scrofa_bamei | ENSSSCP00050002972 | 99.9058 | 99.8117 | sus_scrofa_hampshire | ENSSSCP00035014983 | 99.9058 | 99.8117 |
ENSSSCG00050005011 | sus_scrofa_bamei | ENSSSCP00050002972 | 99.8117 | 99.7175 | sus_scrofa_berkshire | ENSSSCP00065008611 | 99.8117 | 99.7175 |
ENSSSCG00050005011 | sus_scrofa_bamei | ENSSSCP00050002972 | 99.9058 | 99.8117 | sus_scrofa_meishan | ENSSSCP00040047046 | 99.9058 | 99.8117 |
ENSSSCG00050005011 | sus_scrofa_bamei | ENSSSCP00050002972 | 99.9058 | 99.8117 | sus_scrofa_rongchang | ENSSSCP00030044609 | 99.9058 | 99.8117 |
ENSSSCG00050005011 | sus_scrofa_bamei | ENSSSCP00050002972 | 94.9153 | 91.7137 | ovis_aries_rambouillet | ENSOARP00020024808 | 94.6479 | 91.4554 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |