RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00050000750	Gene ID		Accession	-
Symbol	PURG	Alias	-	Full Name	NA
Status	Confidence	Length	181487 bases	Strand	Minus strand
Position	LUXV01009350.1 : 1625416 - 1806902	RNA binding domain	PurA
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00050000203	PurA	PF04845	6.7e-109	1
ENSSSCP00050000191	PurA	PF04845	3.7e-91	1
ENSSSCP00050000187	PurA	PF04845	1.9e-90	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
PURG-201	ENSSSCT00050000827	11006	3196aa	ENSSSCP00050000163
PURG-202	ENSSSCT00050000881	2730	351aa	ENSSSCP00050000187
PURG-203	ENSSSCT00050000895	1094	324aa	ENSSSCP00050000191
PURG-204	ENSSSCT00050000918	5379	349aa	ENSSSCP00050000203

Gene Model

Click here to download ENSSSCG00050000750's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00050000750's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00050000750

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00050000750	sus_scrofa_bamei	ENSSSCP00050000163	99.9374	99.8748	sus_scrofa_usmarc	ENSSSCP00070045121	99.9374	99.8748
ENSSSCG00050000750	sus_scrofa_bamei	ENSSSCP00050000163	7.35294	7.32165	sus_scrofa	ENSSSCP00000016787	99.1561	98.7342
ENSSSCG00050000750	sus_scrofa_bamei	ENSSSCP00050000163	99.9061	99.8123	sus_scrofa_largewhite	ENSSSCP00025027927	99.9061	99.8123
ENSSSCG00050000750	sus_scrofa_bamei	ENSSSCP00050000163	85.2315	75.4068	equus_caballus	ENSECAP00000030689	85.2849	75.454
ENSSSCG00050000750	sus_scrofa_bamei	ENSSSCP00050000163	73.592	64.1427	bos_taurus	ENSBTAP00000022719	82.1229	71.5782
ENSSSCG00050000750	sus_scrofa_bamei	ENSSSCP00050000163	87.9537	87.7347	sus_scrofa_wuzhishan	ENSSSCP00005040742	99.2585	99.0113
ENSSSCG00050000750	sus_scrofa_bamei	ENSSSCP00050000163	99.9374	99.8436	sus_scrofa_jinhua	ENSSSCP00060025151	99.9374	99.8436
ENSSSCG00050000750	sus_scrofa_bamei	ENSSSCP00050000163	99.9374	99.8436	sus_scrofa_landrace	ENSSSCP00045002233	99.9374	99.8436
ENSSSCG00050000750	sus_scrofa_bamei	ENSSSCP00050000163	99.9374	99.9061	sus_scrofa_tibetan	ENSSSCP00015001405	99.9374	99.9061
ENSSSCG00050000750	sus_scrofa_bamei	ENSSSCP00050000163	99.9061	99.8123	sus_scrofa_pietrain	ENSSSCP00055018168	99.9061	99.8123
ENSSSCG00050000750	sus_scrofa_bamei	ENSSSCP00050000163	88.5795	88.2353	sus_scrofa_hampshire	ENSSSCP00035001422	98.3669	97.9847
ENSSSCG00050000750	sus_scrofa_bamei	ENSSSCP00050000163	88.6733	88.2666	sus_scrofa_berkshire	ENSSSCP00065044561	98.4712	98.0195
ENSSSCG00050000750	sus_scrofa_bamei	ENSSSCP00050000163	88.0476	87.9537	sus_scrofa_meishan	ENSSSCP00040021714	99.3644	99.2585
ENSSSCG00050000750	sus_scrofa_bamei	ENSSSCP00050000163	87.985	87.8911	sus_scrofa_rongchang	ENSSSCP00030047605	99.2938	99.1879
ENSSSCG00050000750	sus_scrofa_bamei	ENSSSCP00050000163	69.7121	59.7935	ovis_aries_rambouillet	ENSOARP00020008685	80.2594	68.8401

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression