| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00050000440 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
4383 bases |
Strand |
Minus strand |
| Position |
LUXV01007539.1 : 1711191 - 1715573 |
RNA binding domain |
Ribosomal_L23eN , Ribosomal_L23 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00050000077 |
Ribosomal_L23eN |
PF03939 |
2.1e-27 |
1 |
| ENSSSCP00050000077 |
Ribosomal_L23 |
PF00276 |
7e-16 |
2 |
| ENSSSCP00050000073 |
Ribosomal_L23eN |
PF03939 |
2.5e-27 |
1 |
| ENSSSCP00050000073 |
Ribosomal_L23 |
PF00276 |
7.8e-16 |
2 |
| ENSSSCP00050000066 |
Ribosomal_L23eN |
PF03939 |
4e-27 |
1 |
| ENSSSCP00050000066 |
Ribosomal_L23 |
PF00276 |
6e-16 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00050000473 |
1557 |
169aa |
ENSSSCP00050000066 |
| - |
ENSSSCT00050000502 |
2132 |
189aa |
ENSSSCP00050000073 |
| - |
ENSSSCT00050000525 |
1141 |
176aa |
ENSSSCP00050000077 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050030097 | 94.2308 | 92.9487 | sus_scrofa_bamei | ENSSSCP00050000073 | 77.7778 | 76.7196 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050042460 | 86.2069 | 81.0345 | sus_scrofa_bamei | ENSSSCP00050000073 | 52.9101 | 49.7355 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 77.7778 | 76.1905 | sus_scrofa_usmarc | ENSSSCP00070018880 | 94.2308 | 92.3077 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 77.7778 | 76.1905 | sus_scrofa | ENSSSCP00000032171 | 94.2308 | 92.3077 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 77.7778 | 76.1905 | sus_scrofa_largewhite | ENSSSCP00025030746 | 94.2308 | 92.3077 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 75.6614 | 73.545 | bos_taurus | ENSBTAP00000037816 | 92.2581 | 89.6774 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 77.7778 | 76.7196 | bos_taurus | ENSBTAP00000037041 | 93.038 | 91.7721 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 77.2487 | 76.1905 | bos_taurus | ENSBTAP00000056204 | 97.9866 | 96.6443 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 76.7196 | 75.6614 | bos_taurus | ENSBTAP00000028781 | 91.7721 | 90.5063 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 78.836 | 77.7778 | bos_taurus | ENSBTAP00000030092 | 94.3038 | 93.038 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 50.2645 | 44.9735 | bos_taurus | ENSBTAP00000059204 | 77.2358 | 69.1057 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 85.7143 | 85.1852 | sus_scrofa_wuzhishan | ENSSSCP00005042318 | 95.858 | 95.2663 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 91.5344 | 90.4762 | sus_scrofa_jinhua | ENSSSCP00060039175 | 98.2955 | 97.1591 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 85.7143 | 85.1852 | sus_scrofa_landrace | ENSSSCP00045037107 | 95.858 | 95.2663 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 92.0635 | 91.0053 | sus_scrofa_tibetan | ENSSSCP00015040516 | 98.8636 | 97.7273 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 85.1852 | 85.1852 | sus_scrofa_pietrain | ENSSSCP00055003490 | 96.988 | 96.988 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 99.4709 | 99.4709 | sus_scrofa_hampshire | ENSSSCP00035033179 | 99.4709 | 99.4709 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 77.7778 | 76.1905 | sus_scrofa_berkshire | ENSSSCP00065028131 | 94.2308 | 92.3077 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 91.5344 | 90.4762 | sus_scrofa_meishan | ENSSSCP00040023023 | 98.2955 | 97.1591 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 99.4709 | 99.4709 | sus_scrofa_rongchang | ENSSSCP00030037587 | 99.4709 | 99.4709 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 77.7778 | 76.7196 | ovis_aries_rambouillet | ENSOARP00020024279 | 94.2308 | 92.9487 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 76.7196 | 74.6032 | ovis_aries_rambouillet | ENSOARP00020033445 | 92.9487 | 90.3846 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 72.4868 | 69.3122 | ovis_aries_rambouillet | ENSOARP00020024497 | 88.3871 | 84.5161 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 79.8942 | 78.836 | ovis_aries_rambouillet | ENSOARP00020011461 | 82.5137 | 81.4208 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 61.9048 | 60.3175 | ovis_aries_rambouillet | ENSOARP00020004820 | 88.6364 | 86.3636 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 77.7778 | 75.1323 | ovis_aries_rambouillet | ENSOARP00020013948 | 94.2308 | 91.0256 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 76.1905 | 74.0741 | ovis_aries_rambouillet | ENSOARP00020001137 | 92.3077 | 89.7436 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 77.7778 | 76.1905 | ovis_aries_rambouillet | ENSOARP00020027129 | 94.2308 | 92.3077 |
| ENSSSCG00050000440 | sus_scrofa_bamei | ENSSSCP00050000073 | 77.2487 | 76.1905 | ovis_aries_rambouillet | ENSOARP00020002147 | 93.5897 | 92.3077 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
