| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00045039486 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
13611 bases |
Strand |
Plus strand |
| Position |
LUXT01090816.1 : 372430 - 386040 |
RNA binding domain |
tRNA-synt_1g , tRNA-synt_1 , Anticodon_1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00045048985 |
tRNA-synt_1g |
PF09334 |
8.2e-11 |
1 |
| ENSSSCP00045048985 |
tRNA-synt_1 |
PF00133 |
6e-203 |
2 |
| ENSSSCP00045048985 |
Anticodon_1 |
PF08264 |
1.1e-32 |
3 |
| ENSSSCP00045048996 |
tRNA-synt_1g |
PF09334 |
9.1e-11 |
1 |
| ENSSSCP00045048996 |
tRNA-synt_1 |
PF00133 |
6.6e-203 |
2 |
| ENSSSCP00045048996 |
Anticodon_1 |
PF08264 |
1.2e-32 |
3 |
| ENSSSCP00045048987 |
tRNA-synt_1g |
PF09334 |
1.1e-10 |
1 |
| ENSSSCP00045048987 |
tRNA-synt_1 |
PF00133 |
7.4e-203 |
2 |
| ENSSSCP00045048987 |
Anticodon_1 |
PF08264 |
1.2e-32 |
3 |
| ENSSSCP00045049007 |
tRNA-synt_1g |
PF09334 |
1.5e-10 |
1 |
| ENSSSCP00045049007 |
tRNA-synt_1 |
PF00133 |
4.3e-203 |
2 |
| ENSSSCP00045049007 |
Anticodon_1 |
PF08264 |
4.7e-27 |
3 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00045068791 |
4297 |
1265aa |
ENSSSCP00045048985 |
| - |
ENSSSCT00045068793 |
4432 |
1340aa |
ENSSSCP00045048987 |
| - |
ENSSSCT00045068802 |
4297 |
1295aa |
ENSSSCP00045048996 |
| - |
ENSSSCT00045068816 |
3726 |
1241aa |
ENSSSCP00045049007 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00045039486 | sus_scrofa_landrace | ENSSSCP00045018629 | 31.8408 | 16.5423 | sus_scrofa_landrace | ENSSSCP00045048987 | 19.1045 | 9.92537 |
| ENSSSCG00045039486 | sus_scrofa_landrace | ENSSSCP00045045422 | 27.7134 | 13.0664 | sus_scrofa_landrace | ENSSSCP00045048987 | 19.6269 | 9.25373 |
| ENSSSCG00045039486 | sus_scrofa_landrace | ENSSSCP00045038045 | 24.6586 | 11.7269 | sus_scrofa_landrace | ENSSSCP00045048987 | 22.9104 | 10.8955 |
| ENSSSCG00045039486 | sus_scrofa_landrace | ENSSSCP00045048216 | 63.7476 | 49.6234 | sus_scrofa_landrace | ENSSSCP00045048987 | 50.5224 | 39.3284 |
| ENSSSCG00045039486 | sus_scrofa_landrace | ENSSSCP00045010137 | 24.2472 | 13.0745 | sus_scrofa_landrace | ENSSSCP00045048987 | 22.8358 | 12.3134 |
| ENSSSCG00045039486 | sus_scrofa_landrace | ENSSSCP00045006625 | 35.3535 | 19.5286 | sus_scrofa_landrace | ENSSSCP00045048987 | 15.6716 | 8.65672 |
| ENSSSCG00045039486 | sus_scrofa_landrace | ENSSSCP00045040843 | 37.4233 | 22.4949 | sus_scrofa_landrace | ENSSSCP00045048987 | 27.3134 | 16.4179 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00045039486 | sus_scrofa_landrace | ENSSSCP00045048987 | 91.2687 | 88.806 | equus_caballus | ENSECAP00000013051 | 96.6798 | 94.0711 |
| ENSSSCG00045039486 | sus_scrofa_landrace | ENSSSCP00045048987 | 89.4776 | 89.1045 | sus_scrofa | ENSSSCP00000058218 | 96.9281 | 96.5238 |
| ENSSSCG00045039486 | sus_scrofa_landrace | ENSSSCP00045048987 | 94.5522 | 94.3284 | sus_scrofa_usmarc | ENSSSCP00070039596 | 96.9396 | 96.71 |
| ENSSSCG00045039486 | sus_scrofa_landrace | ENSSSCP00045048987 | 99.7015 | 99.7015 | sus_scrofa_rongchang | ENSSSCP00030036316 | 99.7015 | 99.7015 |
| ENSSSCG00045039486 | sus_scrofa_landrace | ENSSSCP00045048987 | 89.4776 | 89.403 | sus_scrofa_wuzhishan | ENSSSCP00005040629 | 96.0737 | 95.9936 |
| ENSSSCG00045039486 | sus_scrofa_landrace | ENSSSCP00045048987 | 92.9851 | 92.8358 | sus_scrofa_jinhua | ENSSSCP00060037139 | 98.498 | 98.3399 |
| ENSSSCG00045039486 | sus_scrofa_landrace | ENSSSCP00045048987 | 91.6418 | 89.6269 | bos_taurus | ENSBTAP00000007404 | 97.1519 | 95.0158 |
| ENSSSCG00045039486 | sus_scrofa_landrace | ENSSSCP00045048987 | 92.9104 | 92.8358 | sus_scrofa_bamei | ENSSSCP00050006837 | 98.419 | 98.3399 |
| ENSSSCG00045039486 | sus_scrofa_landrace | ENSSSCP00045048987 | 91.4179 | 89.403 | ovis_aries_rambouillet | ENSOARP00020016132 | 96.9146 | 94.7785 |
| ENSSSCG00045039486 | sus_scrofa_landrace | ENSSSCP00045048987 | 93.0597 | 92.9104 | sus_scrofa_berkshire | ENSSSCP00065026837 | 98.5771 | 98.419 |
| ENSSSCG00045039486 | sus_scrofa_landrace | ENSSSCP00045048987 | 94.8507 | 94.7761 | sus_scrofa_hampshire | ENSSSCP00035008644 | 99.3745 | 99.2963 |
| ENSSSCG00045039486 | sus_scrofa_landrace | ENSSSCP00045048987 | 92.9851 | 92.9104 | sus_scrofa_meishan | ENSSSCP00040027367 | 98.498 | 98.419 |
| ENSSSCG00045039486 | sus_scrofa_landrace | ENSSSCP00045048987 | 92.9104 | 92.8358 | sus_scrofa_tibetan | ENSSSCP00015047081 | 98.419 | 98.3399 |
| ENSSSCG00045039486 | sus_scrofa_landrace | ENSSSCP00045048987 | 99.8507 | 99.8507 | sus_scrofa_pietrain | ENSSSCP00055045562 | 99.8507 | 99.8507 |
| ENSSSCG00045039486 | sus_scrofa_landrace | ENSSSCP00045048987 | 93.0597 | 92.9851 | sus_scrofa_largewhite | ENSSSCP00025046908 | 98.5771 | 98.498 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
