RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00045039018 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
17004 bases |
Strand |
Minus strand |
Position |
LUXT01090816.1 : 857307 - 874310 |
RNA binding domain |
tRNA-synt_1g , tRNA-synt_1 , Anticodon_1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00045048232 |
tRNA-synt_1g |
PF09334 |
4.4e-14 |
1 |
ENSSSCP00045048232 |
tRNA-synt_1 |
PF00133 |
9.4e-162 |
2 |
ENSSSCP00045048232 |
tRNA-synt_1 |
PF00133 |
9.4e-162 |
3 |
ENSSSCP00045048232 |
Anticodon_1 |
PF08264 |
3.2e-31 |
4 |
ENSSSCP00045048216 |
tRNA-synt_1g |
PF09334 |
4.9e-14 |
1 |
ENSSSCP00045048216 |
tRNA-synt_1 |
PF00133 |
1e-181 |
2 |
ENSSSCP00045048216 |
Anticodon_1 |
PF08264 |
3.3e-31 |
3 |
ENSSSCP00045048239 |
tRNA-synt_1g |
PF09334 |
1.1e-11 |
1 |
ENSSSCP00045048239 |
tRNA-synt_1 |
PF00133 |
3e-162 |
2 |
ENSSSCP00045048239 |
Anticodon_1 |
PF08264 |
3.1e-31 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00045067842 |
5542 |
1062aa |
ENSSSCP00045048216 |
- |
ENSSSCT00045067862 |
3456 |
1028aa |
ENSSSCP00045048232 |
- |
ENSSSCT00045067870 |
3391 |
1027aa |
ENSSSCP00045048239 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00045039018 | sus_scrofa_landrace | ENSSSCP00045048987 | 50.5224 | 39.3284 | sus_scrofa_landrace | ENSSSCP00045048216 | 63.7476 | 49.6234 |
ENSSSCG00045039018 | sus_scrofa_landrace | ENSSSCP00045018629 | 32.7114 | 17.9104 | sus_scrofa_landrace | ENSSSCP00045048216 | 24.7646 | 13.5593 |
ENSSSCG00045039018 | sus_scrofa_landrace | ENSSSCP00045045422 | 26.6596 | 12.0126 | sus_scrofa_landrace | ENSSSCP00045048216 | 23.823 | 10.7345 |
ENSSSCG00045039018 | sus_scrofa_landrace | ENSSSCP00045038045 | 24.498 | 11.4056 | sus_scrofa_landrace | ENSSSCP00045048216 | 28.7194 | 13.371 |
ENSSSCG00045039018 | sus_scrofa_landrace | ENSSSCP00045010137 | 23.0586 | 12.5198 | sus_scrofa_landrace | ENSSSCP00045048216 | 27.4011 | 14.8776 |
ENSSSCG00045039018 | sus_scrofa_landrace | ENSSSCP00045006625 | 34.5118 | 20.5387 | sus_scrofa_landrace | ENSSSCP00045048216 | 19.3032 | 11.4878 |
ENSSSCG00045039018 | sus_scrofa_landrace | ENSSSCP00045040843 | 34.4581 | 20.7566 | sus_scrofa_landrace | ENSSSCP00045048216 | 31.7326 | 19.1149 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00045039018 | sus_scrofa_landrace | ENSSSCP00045048216 | 93.9736 | 90.5838 | equus_caballus | ENSECAP00000016976 | 88.6323 | 85.4352 |
ENSSSCG00045039018 | sus_scrofa_landrace | ENSSSCP00045048216 | 99.8117 | 99.8117 | sus_scrofa | ENSSSCP00000001464 | 99.8117 | 99.8117 |
ENSSSCG00045039018 | sus_scrofa_landrace | ENSSSCP00045048216 | 99.9058 | 99.9058 | sus_scrofa_usmarc | ENSSSCP00070041357 | 99.9058 | 99.9058 |
ENSSSCG00045039018 | sus_scrofa_landrace | ENSSSCP00045048216 | 99.9058 | 99.9058 | sus_scrofa_rongchang | ENSSSCP00030044609 | 99.9058 | 99.9058 |
ENSSSCG00045039018 | sus_scrofa_landrace | ENSSSCP00045048216 | 99.8117 | 99.8117 | sus_scrofa_wuzhishan | ENSSSCP00005030533 | 99.8117 | 99.8117 |
ENSSSCG00045039018 | sus_scrofa_landrace | ENSSSCP00045048216 | 99.6234 | 99.435 | sus_scrofa_jinhua | ENSSSCP00060025131 | 99.6234 | 99.435 |
ENSSSCG00045039018 | sus_scrofa_landrace | ENSSSCP00045048216 | 94.9153 | 91.9021 | bos_taurus | ENSBTAP00000014160 | 94.6479 | 91.6432 |
ENSSSCG00045039018 | sus_scrofa_landrace | ENSSSCP00045048216 | 99.9058 | 99.8117 | sus_scrofa_bamei | ENSSSCP00050002972 | 99.9058 | 99.8117 |
ENSSSCG00045039018 | sus_scrofa_landrace | ENSSSCP00045048216 | 94.8211 | 91.7137 | ovis_aries_rambouillet | ENSOARP00020024808 | 94.554 | 91.4554 |
ENSSSCG00045039018 | sus_scrofa_landrace | ENSSSCP00045048216 | 99.8117 | 99.8117 | sus_scrofa_berkshire | ENSSSCP00065008611 | 99.8117 | 99.8117 |
ENSSSCG00045039018 | sus_scrofa_landrace | ENSSSCP00045048216 | 99.8117 | 99.8117 | sus_scrofa_hampshire | ENSSSCP00035014983 | 99.8117 | 99.8117 |
ENSSSCG00045039018 | sus_scrofa_landrace | ENSSSCP00045048216 | 99.9058 | 99.9058 | sus_scrofa_meishan | ENSSSCP00040047046 | 99.9058 | 99.9058 |
ENSSSCG00045039018 | sus_scrofa_landrace | ENSSSCP00045048216 | 99.8117 | 99.8117 | sus_scrofa_tibetan | ENSSSCP00015023924 | 99.8117 | 99.8117 |
ENSSSCG00045039018 | sus_scrofa_landrace | ENSSSCP00045048216 | 99.8117 | 99.7175 | sus_scrofa_pietrain | ENSSSCP00055048353 | 99.8117 | 99.7175 |
ENSSSCG00045039018 | sus_scrofa_landrace | ENSSSCP00045048216 | 99.6234 | 99.5292 | sus_scrofa_largewhite | ENSSSCP00025049005 | 99.6234 | 99.5292 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |