Description

Ensembl ID ENSSSCG00045039018 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 17004 bases Strand Minus strand
Position LUXT01090816.1 : 857307 - 874310 RNA binding domain tRNA-synt_1g , tRNA-synt_1 , Anticodon_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00045048232 tRNA-synt_1g PF09334 4.4e-14 1
ENSSSCP00045048232 tRNA-synt_1 PF00133 9.4e-162 2
ENSSSCP00045048232 tRNA-synt_1 PF00133 9.4e-162 3
ENSSSCP00045048232 Anticodon_1 PF08264 3.2e-31 4
ENSSSCP00045048216 tRNA-synt_1g PF09334 4.9e-14 1
ENSSSCP00045048216 tRNA-synt_1 PF00133 1e-181 2
ENSSSCP00045048216 Anticodon_1 PF08264 3.3e-31 3
ENSSSCP00045048239 tRNA-synt_1g PF09334 1.1e-11 1
ENSSSCP00045048239 tRNA-synt_1 PF00133 3e-162 2
ENSSSCP00045048239 Anticodon_1 PF08264 3.1e-31 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00045067842 5542 1062aa ENSSSCP00045048216
- ENSSSCT00045067862 3456 1028aa ENSSSCP00045048232
- ENSSSCT00045067870 3391 1027aa ENSSSCP00045048239

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00045039018sus_scrofa_landraceENSSSCP0004504898750.522439.3284sus_scrofa_landraceENSSSCP0004504821663.747649.6234
ENSSSCG00045039018sus_scrofa_landraceENSSSCP0004501862932.711417.9104sus_scrofa_landraceENSSSCP0004504821624.764613.5593
ENSSSCG00045039018sus_scrofa_landraceENSSSCP0004504542226.659612.0126sus_scrofa_landraceENSSSCP0004504821623.82310.7345
ENSSSCG00045039018sus_scrofa_landraceENSSSCP0004503804524.49811.4056sus_scrofa_landraceENSSSCP0004504821628.719413.371
ENSSSCG00045039018sus_scrofa_landraceENSSSCP0004501013723.058612.5198sus_scrofa_landraceENSSSCP0004504821627.401114.8776
ENSSSCG00045039018sus_scrofa_landraceENSSSCP0004500662534.511820.5387sus_scrofa_landraceENSSSCP0004504821619.303211.4878
ENSSSCG00045039018sus_scrofa_landraceENSSSCP0004504084334.458120.7566sus_scrofa_landraceENSSSCP0004504821631.732619.1149

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00045039018sus_scrofa_landraceENSSSCP0004504821693.973690.5838equus_caballusENSECAP0000001697688.632385.4352
ENSSSCG00045039018sus_scrofa_landraceENSSSCP0004504821699.811799.8117sus_scrofaENSSSCP0000000146499.811799.8117
ENSSSCG00045039018sus_scrofa_landraceENSSSCP0004504821699.905899.9058sus_scrofa_usmarcENSSSCP0007004135799.905899.9058
ENSSSCG00045039018sus_scrofa_landraceENSSSCP0004504821699.905899.9058sus_scrofa_rongchangENSSSCP0003004460999.905899.9058
ENSSSCG00045039018sus_scrofa_landraceENSSSCP0004504821699.811799.8117sus_scrofa_wuzhishanENSSSCP0000503053399.811799.8117
ENSSSCG00045039018sus_scrofa_landraceENSSSCP0004504821699.623499.435sus_scrofa_jinhuaENSSSCP0006002513199.623499.435
ENSSSCG00045039018sus_scrofa_landraceENSSSCP0004504821694.915391.9021bos_taurusENSBTAP0000001416094.647991.6432
ENSSSCG00045039018sus_scrofa_landraceENSSSCP0004504821699.905899.8117sus_scrofa_bameiENSSSCP0005000297299.905899.8117
ENSSSCG00045039018sus_scrofa_landraceENSSSCP0004504821694.821191.7137ovis_aries_rambouilletENSOARP0002002480894.55491.4554
ENSSSCG00045039018sus_scrofa_landraceENSSSCP0004504821699.811799.8117sus_scrofa_berkshireENSSSCP0006500861199.811799.8117
ENSSSCG00045039018sus_scrofa_landraceENSSSCP0004504821699.811799.8117sus_scrofa_hampshireENSSSCP0003501498399.811799.8117
ENSSSCG00045039018sus_scrofa_landraceENSSSCP0004504821699.905899.9058sus_scrofa_meishanENSSSCP0004004704699.905899.9058
ENSSSCG00045039018sus_scrofa_landraceENSSSCP0004504821699.811799.8117sus_scrofa_tibetanENSSSCP0001502392499.811799.8117
ENSSSCG00045039018sus_scrofa_landraceENSSSCP0004504821699.811799.7175sus_scrofa_pietrainENSSSCP0005504835399.811799.7175
ENSSSCG00045039018sus_scrofa_landraceENSSSCP0004504821699.623499.5292sus_scrofa_largewhiteENSSSCP0002504900599.623499.5292

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression