RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00045034049	Gene ID		Accession	-
Symbol	ILF2	Alias	-	Full Name	NA
Status	Confidence	Length	6985 bases	Strand	Minus strand
Position	LUXT01073853.1 : 48082 - 55066	RNA binding domain	DZF
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00045040870	DZF	PF07528	4.2e-95	1
ENSSSCP00045040943	DZF	PF07528	4.2e-95	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
ILF2-201	ENSSSCT00045058466	2116	390aa	ENSSSCP00045040870
ILF2-202	ENSSSCT00045058564	1497	390aa	ENSSSCP00045040943

Gene Model

Click here to download ENSSSCG00045034049's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00045034049's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045030003	17.2228	9.36491	sus_scrofa_landrace	ENSSSCP00045040870	41.0256	22.3077
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045005756	11.0919	5.54593	sus_scrofa_landrace	ENSSSCP00045040870	16.4103	8.20513
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045040889	7.66773	3.83387	sus_scrofa_landrace	ENSSSCP00045040870	6.15385	3.07692
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045019648	15.8209	8.95522	sus_scrofa_landrace	ENSSSCP00045040870	40.7692	23.0769
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045003548	23.5988	11.5044	sus_scrofa_landrace	ENSSSCP00045040870	41.0256	20
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045014054	8.06962	3.16456	sus_scrofa_landrace	ENSSSCP00045040870	13.0769	5.12821
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045034148	12.5664	6.0177	sus_scrofa_landrace	ENSSSCP00045040870	18.2051	8.71795
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045029358	15.0198	7.31225	sus_scrofa_landrace	ENSSSCP00045040870	19.4872	9.48718
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045000813	9.83607	4.09836	sus_scrofa_landrace	ENSSSCP00045040870	9.23077	3.84615
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045042495	10.9091	5.19481	sus_scrofa_landrace	ENSSSCP00045040870	21.5385	10.2564
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045003772	7.27802	3.34789	sus_scrofa_landrace	ENSSSCP00045040870	12.8205	5.89744
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045022745	16.2	8.7	sus_scrofa_landrace	ENSSSCP00045040870	41.5385	22.3077
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045017463	7.77114	3.67208	sus_scrofa_landrace	ENSSSCP00045040870	23.3333	11.0256
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045031480	11.5057	5.39773	sus_scrofa_landrace	ENSSSCP00045040870	20.7692	9.74359

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045040870	99.4872	99.2308	equus_caballus	ENSECAP00000035579	95.3317	95.086
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045040870	100	100	sus_scrofa	ENSSSCP00000030729	100	100
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045040870	100	100	sus_scrofa_usmarc	ENSSSCP00070047684	100	100
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045040870	99.7436	99.7436	sus_scrofa_rongchang	ENSSSCP00030037347	98.481	98.481
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045040870	98.4615	98.4615	sus_scrofa_wuzhishan	ENSSSCP00005015825	100	100
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045040870	99.7436	99.7436	sus_scrofa_jinhua	ENSSSCP00060040263	98.481	98.481
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045040870	79.4872	62.8205	bos_taurus	ENSBTAP00000059140	77.6942	61.4035
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045040870	100	100	sus_scrofa_bamei	ENSSSCP00050006547	100	100
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045040870	99.7436	99.4872	ovis_aries_rambouillet	ENSOARP00020001176	99.7436	99.4872
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045040870	100	100	sus_scrofa_berkshire	ENSSSCP00065046453	100	100
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045040870	99.7436	99.7436	sus_scrofa_hampshire	ENSSSCP00035046727	98.481	98.481
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045040870	100	100	sus_scrofa_meishan	ENSSSCP00040018047	100	100
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045040870	100	100	sus_scrofa_tibetan	ENSSSCP00015013227	100	100
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045040870	100	100	sus_scrofa_pietrain	ENSSSCP00055010542	100	100
ENSSSCG00045034049	sus_scrofa_landrace	ENSSSCP00045040870	100	99.7436	sus_scrofa_largewhite	ENSSSCP00025011637	100	99.7436

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression