| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00045033610 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
54968 bases |
Strand |
Minus strand |
| Position |
LUXT01052856.1 : 201264 - 256231 |
RNA binding domain |
tRNA-synt_1g , tRNA-synt_1 , Anticodon_1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00045040727 |
tRNA-synt_1g |
PF09334 |
1.2e-20 |
1 |
| ENSSSCP00045040727 |
tRNA-synt_1 |
PF00133 |
6.3e-146 |
2 |
| ENSSSCP00045040727 |
tRNA-synt_1 |
PF00133 |
6.3e-146 |
3 |
| ENSSSCP00045040727 |
Anticodon_1 |
PF08264 |
7.9e-26 |
4 |
| ENSSSCP00045040950 |
tRNA-synt_1g |
PF09334 |
1.3e-20 |
1 |
| ENSSSCP00045040950 |
tRNA-synt_1 |
PF00133 |
6.1e-146 |
2 |
| ENSSSCP00045040950 |
tRNA-synt_1 |
PF00133 |
6.1e-146 |
3 |
| ENSSSCP00045040950 |
Anticodon_1 |
PF08264 |
7.9e-26 |
4 |
| ENSSSCP00045040843 |
tRNA-synt_1g |
PF09334 |
1.6e-20 |
1 |
| ENSSSCP00045040843 |
tRNA-synt_1 |
PF00133 |
1.4e-145 |
2 |
| ENSSSCP00045040843 |
tRNA-synt_1 |
PF00133 |
1.4e-145 |
3 |
| ENSSSCP00045040843 |
Anticodon_1 |
PF08264 |
8.2e-26 |
4 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00045058257 |
9043 |
958aa |
ENSSSCP00045040727 |
| - |
ENSSSCT00045058422 |
2937 |
978aa |
ENSSSCP00045040843 |
| - |
ENSSSCT00045058573 |
2976 |
945aa |
ENSSSCP00045040950 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00045033610 | sus_scrofa_landrace | ENSSSCP00045048987 | 27.3134 | 16.4179 | sus_scrofa_landrace | ENSSSCP00045040843 | 37.4233 | 22.4949 |
| ENSSSCG00045033610 | sus_scrofa_landrace | ENSSSCP00045018629 | 27.7363 | 14.0547 | sus_scrofa_landrace | ENSSSCP00045040843 | 22.8016 | 11.5542 |
| ENSSSCG00045033610 | sus_scrofa_landrace | ENSSSCP00045045422 | 22.5501 | 10.1159 | sus_scrofa_landrace | ENSSSCP00045040843 | 21.8814 | 9.81595 |
| ENSSSCG00045033610 | sus_scrofa_landrace | ENSSSCP00045038045 | 23.2129 | 10.3614 | sus_scrofa_landrace | ENSSSCP00045040843 | 29.5501 | 13.1902 |
| ENSSSCG00045033610 | sus_scrofa_landrace | ENSSSCP00045048216 | 31.7326 | 19.1149 | sus_scrofa_landrace | ENSSSCP00045040843 | 34.4581 | 20.7566 |
| ENSSSCG00045033610 | sus_scrofa_landrace | ENSSSCP00045010137 | 24.9604 | 14.0254 | sus_scrofa_landrace | ENSSSCP00045040843 | 32.2086 | 18.0982 |
| ENSSSCG00045033610 | sus_scrofa_landrace | ENSSSCP00045006625 | 32.8283 | 18.5185 | sus_scrofa_landrace | ENSSSCP00045040843 | 19.9387 | 11.2474 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00045033610 | sus_scrofa_landrace | ENSSSCP00045040843 | 94.4785 | 88.8548 | equus_caballus | ENSECAP00000041874 | 91.3043 | 85.8696 |
| ENSSSCG00045033610 | sus_scrofa_landrace | ENSSSCP00045040843 | 98.9775 | 98.5685 | sus_scrofa | ENSSSCP00000069528 | 95.6522 | 95.2569 |
| ENSSSCG00045033610 | sus_scrofa_landrace | ENSSSCP00045040843 | 98.773 | 98.364 | sus_scrofa_usmarc | ENSSSCP00070017647 | 95.549 | 95.1533 |
| ENSSSCG00045033610 | sus_scrofa_landrace | ENSSSCP00045040843 | 97.7505 | 96.6258 | sus_scrofa_rongchang | ENSSSCP00030029273 | 94.2801 | 93.1953 |
| ENSSSCG00045033610 | sus_scrofa_landrace | ENSSSCP00045040843 | 41.7178 | 29.3456 | sus_scrofa_wuzhishan | ENSSSCP00005009258 | 51.9745 | 36.5605 |
| ENSSSCG00045033610 | sus_scrofa_landrace | ENSSSCP00045040843 | 86.5031 | 86.0941 | sus_scrofa_wuzhishan | ENSSSCP00005017628 | 87.2165 | 86.8041 |
| ENSSSCG00045033610 | sus_scrofa_landrace | ENSSSCP00045040843 | 96.319 | 94.5808 | sus_scrofa_jinhua | ENSSSCP00060027744 | 92.8994 | 91.2229 |
| ENSSSCG00045033610 | sus_scrofa_landrace | ENSSSCP00045040843 | 94.5808 | 89.8773 | bos_taurus | ENSBTAP00000053447 | 91.4032 | 86.8577 |
| ENSSSCG00045033610 | sus_scrofa_landrace | ENSSSCP00045040843 | 98.8753 | 98.4663 | sus_scrofa_bamei | ENSSSCP00050035118 | 95.5534 | 95.1581 |
| ENSSSCG00045033610 | sus_scrofa_landrace | ENSSSCP00045040843 | 94.4785 | 90.4908 | ovis_aries_rambouillet | ENSOARP00020011478 | 91.3043 | 87.4506 |
| ENSSSCG00045033610 | sus_scrofa_landrace | ENSSSCP00045040843 | 98.9775 | 98.5685 | sus_scrofa_berkshire | ENSSSCP00065012329 | 95.6522 | 95.2569 |
| ENSSSCG00045033610 | sus_scrofa_landrace | ENSSSCP00045040843 | 98.9775 | 98.5685 | sus_scrofa_hampshire | ENSSSCP00035022334 | 95.6522 | 95.2569 |
| ENSSSCG00045033610 | sus_scrofa_landrace | ENSSSCP00045040843 | 98.9775 | 98.5685 | sus_scrofa_meishan | ENSSSCP00040033986 | 95.6522 | 95.2569 |
| ENSSSCG00045033610 | sus_scrofa_landrace | ENSSSCP00045040843 | 95.092 | 94.683 | sus_scrofa_tibetan | ENSSSCP00015028761 | 91.8972 | 91.502 |
| ENSSSCG00045033610 | sus_scrofa_landrace | ENSSSCP00045040843 | 99.0798 | 98.6708 | sus_scrofa_pietrain | ENSSSCP00055012344 | 95.751 | 95.3557 |
| ENSSSCG00045033610 | sus_scrofa_landrace | ENSSSCP00045040843 | 95.501 | 94.8875 | sus_scrofa_largewhite | ENSSSCP00025008847 | 93.4935 | 92.8929 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
