| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00045032677 | Gene ID |
|
Accession |
- |
| Symbol |
POP1 |
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
48167 bases |
Strand |
Plus strand |
| Position |
LUXT01042853.1 : 1943964 - 1992130 |
RNA binding domain |
POPLD , POP1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00045038907 |
POPLD |
PF08170 |
1.4e-26 |
1 |
| ENSSSCP00045038907 |
POP1 |
PF06978 |
1.1e-36 |
2 |
| ENSSSCP00045038907 |
POP1 |
PF06978 |
1.1e-36 |
3 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| POP1-201 |
ENSSSCT00045055795 |
4850 |
1003aa |
ENSSSCP00045038907 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00045032677 | sus_scrofa_landrace | ENSSSCP00045039124 | 37.156 | 18.3486 | sus_scrofa_landrace | ENSSSCP00045038907 | 24.2273 | 11.9641 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00045032677 | sus_scrofa_landrace | ENSSSCP00045038907 | 90.9272 | 84.0479 | equus_caballus | ENSECAP00000021759 | 88.6297 | 81.9242 |
| ENSSSCG00045032677 | sus_scrofa_landrace | ENSSSCP00045038907 | 100 | 100 | sus_scrofa | ENSSSCP00000006490 | 100 | 100 |
| ENSSSCG00045032677 | sus_scrofa_landrace | ENSSSCP00045038907 | 100 | 100 | sus_scrofa_usmarc | ENSSSCP00070021074 | 100 | 100 |
| ENSSSCG00045032677 | sus_scrofa_landrace | ENSSSCP00045038907 | 73.1805 | 72.5823 | sus_scrofa_rongchang | ENSSSCP00030025240 | 96.9617 | 96.1691 |
| ENSSSCG00045032677 | sus_scrofa_landrace | ENSSSCP00045038907 | 99.4018 | 99.2024 | sus_scrofa_wuzhishan | ENSSSCP00005038593 | 99.007 | 98.8083 |
| ENSSSCG00045032677 | sus_scrofa_landrace | ENSSSCP00045038907 | 99.4018 | 99.3021 | sus_scrofa_jinhua | ENSSSCP00060043579 | 99.007 | 98.9076 |
| ENSSSCG00045032677 | sus_scrofa_landrace | ENSSSCP00045038907 | 89.7308 | 85.0449 | bos_taurus | ENSBTAP00000016721 | 88.67 | 84.0394 |
| ENSSSCG00045032677 | sus_scrofa_landrace | ENSSSCP00045038907 | 99.4018 | 99.1027 | sus_scrofa_bamei | ENSSSCP00050004551 | 99.007 | 98.709 |
| ENSSSCG00045032677 | sus_scrofa_landrace | ENSSSCP00045038907 | 89.9302 | 85.0449 | ovis_aries_rambouillet | ENSOARP00020031265 | 88.9546 | 84.1223 |
| ENSSSCG00045032677 | sus_scrofa_landrace | ENSSSCP00045038907 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065033642 | 100 | 100 |
| ENSSSCG00045032677 | sus_scrofa_landrace | ENSSSCP00045038907 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035031364 | 100 | 100 |
| ENSSSCG00045032677 | sus_scrofa_landrace | ENSSSCP00045038907 | 99.5015 | 99.2024 | sus_scrofa_meishan | ENSSSCP00040007062 | 99.1063 | 98.8083 |
| ENSSSCG00045032677 | sus_scrofa_landrace | ENSSSCP00045038907 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055034901 | 100 | 100 |
| ENSSSCG00045032677 | sus_scrofa_landrace | ENSSSCP00045038907 | 100 | 99.8006 | sus_scrofa_largewhite | ENSSSCP00025043757 | 100 | 99.8006 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |