Description

Ensembl ID ENSSSCG00045032677 Gene ID Accession -
Symbol POP1 Alias - Full Name NA
Status Confidence Length 48167 bases Strand Plus strand
Position LUXT01042853.1 : 1943964 - 1992130 RNA binding domain POPLD , POP1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00045038907 POPLD PF08170 1.4e-26 1
ENSSSCP00045038907 POP1 PF06978 1.1e-36 2
ENSSSCP00045038907 POP1 PF06978 1.1e-36 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
POP1-201 ENSSSCT00045055795 4850 1003aa ENSSSCP00045038907

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00045032677sus_scrofa_landraceENSSSCP0004503912437.15618.3486sus_scrofa_landraceENSSSCP0004503890724.227311.9641

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00045032677sus_scrofa_landraceENSSSCP0004503890790.927284.0479equus_caballusENSECAP0000002175988.629781.9242
ENSSSCG00045032677sus_scrofa_landraceENSSSCP00045038907100100sus_scrofaENSSSCP00000006490100100
ENSSSCG00045032677sus_scrofa_landraceENSSSCP00045038907100100sus_scrofa_usmarcENSSSCP00070021074100100
ENSSSCG00045032677sus_scrofa_landraceENSSSCP0004503890773.180572.5823sus_scrofa_rongchangENSSSCP0003002524096.961796.1691
ENSSSCG00045032677sus_scrofa_landraceENSSSCP0004503890799.401899.2024sus_scrofa_wuzhishanENSSSCP0000503859399.00798.8083
ENSSSCG00045032677sus_scrofa_landraceENSSSCP0004503890799.401899.3021sus_scrofa_jinhuaENSSSCP0006004357999.00798.9076
ENSSSCG00045032677sus_scrofa_landraceENSSSCP0004503890789.730885.0449bos_taurusENSBTAP0000001672188.6784.0394
ENSSSCG00045032677sus_scrofa_landraceENSSSCP0004503890799.401899.1027sus_scrofa_bameiENSSSCP0005000455199.00798.709
ENSSSCG00045032677sus_scrofa_landraceENSSSCP0004503890789.930285.0449ovis_aries_rambouilletENSOARP0002003126588.954684.1223
ENSSSCG00045032677sus_scrofa_landraceENSSSCP00045038907100100sus_scrofa_berkshireENSSSCP00065033642100100
ENSSSCG00045032677sus_scrofa_landraceENSSSCP00045038907100100sus_scrofa_hampshireENSSSCP00035031364100100
ENSSSCG00045032677sus_scrofa_landraceENSSSCP0004503890799.501599.2024sus_scrofa_meishanENSSSCP0004000706299.106398.8083
ENSSSCG00045032677sus_scrofa_landraceENSSSCP00045038907100100sus_scrofa_pietrainENSSSCP00055034901100100
ENSSSCG00045032677sus_scrofa_landraceENSSSCP0004503890710099.8006sus_scrofa_largewhiteENSSSCP0002504375710099.8006

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression