| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00045030699 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
100403 bases |
Strand |
Minus strand |
| Position |
LUXT01091673.1 : 592074 - 692476 |
RNA binding domain |
tRNA-synt_1g , tRNA-synt_1e , tRNA-synt_1 , Anticodon_1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00045038960 |
tRNA-synt_1g |
PF09334 |
2.6e-17 |
1 |
| ENSSSCP00045038960 |
tRNA-synt_1g |
PF09334 |
2.6e-17 |
2 |
| ENSSSCP00045038960 |
tRNA-synt_1e |
PF01406 |
1e-06 |
3 |
| ENSSSCP00045038960 |
tRNA-synt_1 |
PF00133 |
9.1e-42 |
4 |
| ENSSSCP00045038960 |
tRNA-synt_1 |
PF00133 |
9.1e-42 |
5 |
| ENSSSCP00045038960 |
Anticodon_1 |
PF08264 |
1e-16 |
6 |
| ENSSSCP00045038808 |
tRNA-synt_1g |
PF09334 |
3.2e-17 |
1 |
| ENSSSCP00045038808 |
tRNA-synt_1g |
PF09334 |
3.2e-17 |
2 |
| ENSSSCP00045038808 |
tRNA-synt_1e |
PF01406 |
1.1e-06 |
3 |
| ENSSSCP00045038808 |
tRNA-synt_1 |
PF00133 |
1.2e-41 |
4 |
| ENSSSCP00045038808 |
tRNA-synt_1 |
PF00133 |
1.2e-41 |
5 |
| ENSSSCP00045038808 |
Anticodon_1 |
PF08264 |
4.9e-11 |
6 |
| ENSSSCP00045039163 |
tRNA-synt_1g |
PF09334 |
3.3e-17 |
1 |
| ENSSSCP00045039163 |
tRNA-synt_1g |
PF09334 |
3.3e-17 |
2 |
| ENSSSCP00045039163 |
tRNA-synt_1e |
PF01406 |
1.1e-06 |
3 |
| ENSSSCP00045039163 |
tRNA-synt_1 |
PF00133 |
1.2e-41 |
4 |
| ENSSSCP00045039163 |
tRNA-synt_1 |
PF00133 |
1.2e-41 |
5 |
| ENSSSCP00045039163 |
Anticodon_1 |
PF08264 |
4.9e-11 |
6 |
| ENSSSCP00045038609 |
tRNA-synt_1g |
PF09334 |
3.4e-17 |
1 |
| ENSSSCP00045038609 |
tRNA-synt_1g |
PF09334 |
3.4e-17 |
2 |
| ENSSSCP00045038609 |
tRNA-synt_1e |
PF01406 |
1.1e-06 |
3 |
| ENSSSCP00045038609 |
tRNA-synt_1 |
PF00133 |
1.3e-41 |
4 |
| ENSSSCP00045038609 |
tRNA-synt_1 |
PF00133 |
1.3e-41 |
5 |
| ENSSSCP00045038609 |
Anticodon_1 |
PF08264 |
1.1e-16 |
6 |
| ENSSSCP00045039610 |
tRNA-synt_1g |
PF09334 |
3.5e-17 |
1 |
| ENSSSCP00045039610 |
tRNA-synt_1g |
PF09334 |
3.5e-17 |
2 |
| ENSSSCP00045039610 |
tRNA-synt_1e |
PF01406 |
1.1e-06 |
3 |
| ENSSSCP00045039610 |
tRNA-synt_1 |
PF00133 |
1.2e-41 |
4 |
| ENSSSCP00045039610 |
tRNA-synt_1 |
PF00133 |
1.2e-41 |
5 |
| ENSSSCP00045039610 |
Anticodon_1 |
PF08264 |
4.9e-11 |
6 |
| ENSSSCP00045039347 |
tRNA-synt_1g |
PF09334 |
3.5e-17 |
1 |
| ENSSSCP00045039347 |
tRNA-synt_1g |
PF09334 |
3.5e-17 |
2 |
| ENSSSCP00045039347 |
tRNA-synt_1e |
PF01406 |
1.1e-06 |
3 |
| ENSSSCP00045039347 |
tRNA-synt_1 |
PF00133 |
1.2e-41 |
4 |
| ENSSSCP00045039347 |
tRNA-synt_1 |
PF00133 |
1.2e-41 |
5 |
| ENSSSCP00045039347 |
Anticodon_1 |
PF08264 |
4.9e-11 |
6 |
| ENSSSCP00045038361 |
tRNA-synt_1g |
PF09334 |
3.5e-17 |
1 |
| ENSSSCP00045038361 |
tRNA-synt_1g |
PF09334 |
3.5e-17 |
2 |
| ENSSSCP00045038361 |
tRNA-synt_1e |
PF01406 |
1.2e-06 |
3 |
| ENSSSCP00045038361 |
tRNA-synt_1 |
PF00133 |
1e-40 |
4 |
| ENSSSCP00045038361 |
tRNA-synt_1 |
PF00133 |
1e-40 |
5 |
| ENSSSCP00045038361 |
Anticodon_1 |
PF08264 |
1.2e-16 |
6 |
| ENSSSCP00045039760 |
tRNA-synt_1g |
PF09334 |
3.7e-17 |
1 |
| ENSSSCP00045039760 |
tRNA-synt_1g |
PF09334 |
3.7e-17 |
2 |
| ENSSSCP00045039760 |
tRNA-synt_1e |
PF01406 |
1.1e-06 |
3 |
| ENSSSCP00045039760 |
tRNA-synt_1 |
PF00133 |
1.4e-41 |
4 |
| ENSSSCP00045039760 |
tRNA-synt_1 |
PF00133 |
1.4e-41 |
5 |
| ENSSSCP00045039760 |
Anticodon_1 |
PF08264 |
1.1e-16 |
6 |
| ENSSSCP00045038045 |
tRNA-synt_1g |
PF09334 |
4e-17 |
1 |
| ENSSSCP00045038045 |
tRNA-synt_1g |
PF09334 |
4e-17 |
2 |
| ENSSSCP00045038045 |
tRNA-synt_1e |
PF01406 |
1.3e-06 |
3 |
| ENSSSCP00045038045 |
tRNA-synt_1 |
PF00133 |
1.7e-41 |
4 |
| ENSSSCP00045038045 |
tRNA-synt_1 |
PF00133 |
1.7e-41 |
5 |
| ENSSSCP00045038045 |
Anticodon_1 |
PF08264 |
1.2e-16 |
6 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00045054622 |
4020 |
1245aa |
ENSSSCP00045038045 |
| - |
ENSSSCT00045055037 |
6255 |
1190aa |
ENSSSCP00045038361 |
| - |
ENSSSCT00045055365 |
6213 |
1176aa |
ENSSSCP00045038609 |
| - |
ENSSSCT00045055637 |
6117 |
1144aa |
ENSSSCP00045038808 |
| - |
ENSSSCT00045055886 |
5901 |
1072aa |
ENSSSCP00045038960 |
| - |
ENSSSCT00045056146 |
6099 |
1144aa |
ENSSSCP00045039163 |
| - |
ENSSSCT00045056389 |
6111 |
1148aa |
ENSSSCP00045039347 |
| - |
ENSSSCT00045056706 |
6099 |
1144aa |
ENSSSCP00045039610 |
| - |
ENSSSCT00045056918 |
4330 |
1182aa |
ENSSSCP00045039760 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00045030699 | sus_scrofa_landrace | ENSSSCP00045048987 | 22.9104 | 10.8955 | sus_scrofa_landrace | ENSSSCP00045038045 | 24.6586 | 11.7269 |
| ENSSSCG00045030699 | sus_scrofa_landrace | ENSSSCP00045018629 | 30.3483 | 13.9303 | sus_scrofa_landrace | ENSSSCP00045038045 | 19.5984 | 8.99598 |
| ENSSSCG00045030699 | sus_scrofa_landrace | ENSSSCP00045045422 | 25.8166 | 9.37829 | sus_scrofa_landrace | ENSSSCP00045038045 | 19.6787 | 7.14859 |
| ENSSSCG00045030699 | sus_scrofa_landrace | ENSSSCP00045048216 | 28.7194 | 13.371 | sus_scrofa_landrace | ENSSSCP00045038045 | 24.498 | 11.4056 |
| ENSSSCG00045030699 | sus_scrofa_landrace | ENSSSCP00045010137 | 24.2472 | 11.3312 | sus_scrofa_landrace | ENSSSCP00045038045 | 24.5783 | 11.4859 |
| ENSSSCG00045030699 | sus_scrofa_landrace | ENSSSCP00045006625 | 31.1448 | 14.4781 | sus_scrofa_landrace | ENSSSCP00045038045 | 14.8594 | 6.90763 |
| ENSSSCG00045030699 | sus_scrofa_landrace | ENSSSCP00045040843 | 29.5501 | 13.1902 | sus_scrofa_landrace | ENSSSCP00045038045 | 23.2129 | 10.3614 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00045030699 | sus_scrofa_landrace | ENSSSCP00045038045 | 88.996 | 84.498 | equus_caballus | ENSECAP00000090615 | 92.953 | 88.255 |
| ENSSSCG00045030699 | sus_scrofa_landrace | ENSSSCP00045038045 | 91.6466 | 90.6827 | sus_scrofa | ENSSSCP00000072832 | 97.1064 | 96.0851 |
| ENSSSCG00045030699 | sus_scrofa_landrace | ENSSSCP00045038045 | 87.4699 | 86.5863 | sus_scrofa_usmarc | ENSSSCP00070007040 | 96.9724 | 95.9929 |
| ENSSSCG00045030699 | sus_scrofa_landrace | ENSSSCP00045038045 | 99.9197 | 99.8394 | sus_scrofa_rongchang | ENSSSCP00030044135 | 99.9197 | 99.8394 |
| ENSSSCG00045030699 | sus_scrofa_landrace | ENSSSCP00045038045 | 88.3534 | 87.4699 | sus_scrofa_wuzhishan | ENSSSCP00005023874 | 95.4033 | 94.4493 |
| ENSSSCG00045030699 | sus_scrofa_landrace | ENSSSCP00045038045 | 96.8675 | 96.3855 | sus_scrofa_jinhua | ENSSSCP00060018257 | 97.8102 | 97.3236 |
| ENSSSCG00045030699 | sus_scrofa_landrace | ENSSSCP00045038045 | 89.4779 | 85.1406 | bos_taurus | ENSBTAP00000008902 | 94.7279 | 90.1361 |
| ENSSSCG00045030699 | sus_scrofa_landrace | ENSSSCP00045038045 | 96.9478 | 96.3855 | sus_scrofa_bamei | ENSSSCP00050017822 | 97.8913 | 97.3236 |
| ENSSSCG00045030699 | sus_scrofa_landrace | ENSSSCP00045038045 | 89.4779 | 85.0602 | ovis_aries_rambouillet | ENSOARP00020028522 | 94.7279 | 90.051 |
| ENSSSCG00045030699 | sus_scrofa_landrace | ENSSSCP00045038045 | 89.4779 | 85.1406 | ovis_aries_rambouillet | ENSOARP00020026191 | 94.7279 | 90.1361 |
| ENSSSCG00045030699 | sus_scrofa_landrace | ENSSSCP00045038045 | 96.8675 | 96.3052 | sus_scrofa_berkshire | ENSSSCP00065046360 | 97.8102 | 97.2425 |
| ENSSSCG00045030699 | sus_scrofa_landrace | ENSSSCP00045038045 | 91.7269 | 90.8434 | sus_scrofa_hampshire | ENSSSCP00035002767 | 95.9664 | 95.042 |
| ENSSSCG00045030699 | sus_scrofa_landrace | ENSSSCP00045038045 | 98.3133 | 98.0723 | sus_scrofa_meishan | ENSSSCP00040000872 | 99.6743 | 99.43 |
| ENSSSCG00045030699 | sus_scrofa_landrace | ENSSSCP00045038045 | 87.1486 | 85.5422 | sus_scrofa_tibetan | ENSSSCP00015015405 | 94.8427 | 93.0944 |
| ENSSSCG00045030699 | sus_scrofa_landrace | ENSSSCP00045038045 | 91.7269 | 90.9237 | sus_scrofa_pietrain | ENSSSCP00055044752 | 95.9664 | 95.1261 |
| ENSSSCG00045030699 | sus_scrofa_landrace | ENSSSCP00045038045 | 91.7269 | 90.7631 | sus_scrofa_largewhite | ENSSSCP00025024463 | 95.9664 | 94.958 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
