RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00045027513	Gene ID		Accession	-
Symbol	ANGEL2	Alias	-	Full Name	NA
Status	Confidence	Length	21097 bases	Strand	Minus strand
Position	LUXT01076986.1 : 4367128 - 4388224	RNA binding domain	ANGEL2_N , Exo_endo_phos
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00045032776	ANGEL2_N	PF19339	3.6e-62	1
ENSSSCP00045032776	ANGEL2_N	PF19339	3.6e-62	2
ENSSSCP00045032776	Exo_endo_phos	PF03372	2.9e-26	3
ENSSSCP00045032858	ANGEL2_N	PF19339	4.1e-62	1
ENSSSCP00045032858	ANGEL2_N	PF19339	4.1e-62	2
ENSSSCP00045032858	Exo_endo_phos	PF03372	1.6e-26	3
ENSSSCP00045032519	ANGEL2_N	PF19339	4.4e-62	1
ENSSSCP00045032519	ANGEL2_N	PF19339	4.4e-62	2
ENSSSCP00045032519	Exo_endo_phos	PF03372	1.7e-26	3
ENSSSCP00045032584	ANGEL2_N	PF19339	6.3e-38	1
ENSSSCP00045032584	ANGEL2_N	PF19339	6.3e-38	2
ENSSSCP00045032584	ANGEL2_N	PF19339	6.3e-38	3
ENSSSCP00045032584	Exo_endo_phos	PF03372	1.4e-26	4
ENSSSCP00045032721	ANGEL2_N	PF19339	1.3e-07	1
ENSSSCP00045032721	Exo_endo_phos	PF03372	9.8e-27	2
ENSSSCP00045032670	Exo_endo_phos	PF03372	3.3e-19	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
ANGEL2-201	ENSSSCT00045046847	5531	544aa	ENSSSCP00045032519
ANGEL2-202	ENSSSCT00045046940	5438	513aa	ENSSSCP00045032584
ANGEL2-203	ENSSSCT00045047053	5094	341aa	ENSSSCP00045032670
ANGEL2-204	ENSSSCT00045047130	5180	418aa	ENSSSCP00045032721
ANGEL2-205	ENSSSCT00045047194	2218	508aa	ENSSSCP00045032776
ANGEL2-206	ENSSSCT00045047299	2623	530aa	ENSSSCP00045032858

Gene Model

Click here to download ENSSSCG00045027513's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00045027513's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00045027513	sus_scrofa_landrace	ENSSSCP00045000915	29.4408	17.5987	sus_scrofa_landrace	ENSSSCP00045032519	32.9044	19.6691
ENSSSCG00045027513	sus_scrofa_landrace	ENSSSCP00045025850	46.027	34.033	sus_scrofa_landrace	ENSSSCP00045032519	56.4338	41.7279
ENSSSCG00045027513	sus_scrofa_landrace	ENSSSCP00045019329	36.3426	24.0741	sus_scrofa_landrace	ENSSSCP00045032519	28.8603	19.1176
ENSSSCG00045027513	sus_scrofa_landrace	ENSSSCP00045039773	31.5271	19.7044	sus_scrofa_landrace	ENSSSCP00045032519	35.2941	22.0588
ENSSSCG00045027513	sus_scrofa_landrace	ENSSSCP00045039370	33.9318	20.8259	sus_scrofa_landrace	ENSSSCP00045032519	34.7426	21.3235

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00045027513	sus_scrofa_landrace	ENSSSCP00045032519	93.1985	89.8897	equus_caballus	ENSECAP00000041898	96.7557	93.3206
ENSSSCG00045027513	sus_scrofa_landrace	ENSSSCP00045032519	100	100	sus_scrofa	ENSSSCP00000050701	100	100
ENSSSCG00045027513	sus_scrofa_landrace	ENSSSCP00045032519	100	100	sus_scrofa_usmarc	ENSSSCP00070016920	100	100
ENSSSCG00045027513	sus_scrofa_landrace	ENSSSCP00045032519	99.8162	99.8162	sus_scrofa_rongchang	ENSSSCP00030000545	99.8162	99.8162
ENSSSCG00045027513	sus_scrofa_landrace	ENSSSCP00045032519	95.2206	95.2206	sus_scrofa_wuzhishan	ENSSSCP00005014224	99.8073	99.8073
ENSSSCG00045027513	sus_scrofa_landrace	ENSSSCP00045032519	100	100	sus_scrofa_jinhua	ENSSSCP00060029043	100	100
ENSSSCG00045027513	sus_scrofa_landrace	ENSSSCP00045032519	96.3235	92.2794	bos_taurus	ENSBTAP00000004825	96.3235	92.2794
ENSSSCG00045027513	sus_scrofa_landrace	ENSSSCP00045032519	98.5294	98.1618	sus_scrofa_bamei	ENSSSCP00050005414	96.4029	96.0432
ENSSSCG00045027513	sus_scrofa_landrace	ENSSSCP00045032519	96.6912	92.8309	ovis_aries_rambouillet	ENSOARP00020026034	96.6912	92.8309
ENSSSCG00045027513	sus_scrofa_landrace	ENSSSCP00045032519	100	100	sus_scrofa_berkshire	ENSSSCP00065016572	100	100
ENSSSCG00045027513	sus_scrofa_landrace	ENSSSCP00045032519	100	100	sus_scrofa_hampshire	ENSSSCP00035022503	100	100
ENSSSCG00045027513	sus_scrofa_landrace	ENSSSCP00045032519	96.5074	96.5074	sus_scrofa_meishan	ENSSSCP00040006668	99.8099	99.8099
ENSSSCG00045027513	sus_scrofa_landrace	ENSSSCP00045032519	98.7132	98.3456	sus_scrofa_tibetan	ENSSSCP00015020302	96.5827	96.223
ENSSSCG00045027513	sus_scrofa_landrace	ENSSSCP00045032519	76.6544	76.4706	sus_scrofa_pietrain	ENSSSCP00055010722	99.7608	99.5215
ENSSSCG00045027513	sus_scrofa_landrace	ENSSSCP00045032519	100	100	sus_scrofa_largewhite	ENSSSCP00025036757	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression