RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00045027073	Gene ID		Accession	-
Symbol	EIF2A	Alias	-	Full Name	NA
Status	Confidence	Length	42563 bases	Strand	Minus strand
Position	LUXT01077700.1 : 306330 - 348892	RNA binding domain	eIF2A
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00045033157	eIF2A	PF08662	5.9e-78	1
ENSSSCP00045032733	eIF2A	PF08662	7.1e-78	1
ENSSSCP00045033077	eIF2A	PF08662	8.2e-78	1
ENSSSCP00045032972	eIF2A	PF08662	8.6e-77	1
ENSSSCP00045033247	eIF2A	PF08662	8.8e-77	1
ENSSSCP00045032857	eIF2A	PF08662	1.8e-76	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
EIF2A-201	ENSSSCT00045047147	2632	585aa	ENSSSCP00045032733
EIF2A-202	ENSSSCT00045047298	2326	472aa	ENSSSCP00045032857
EIF2A-203	ENSSSCT00045047493	1982	499aa	ENSSSCP00045032972
EIF2A-205	ENSSSCT00045047633	3542	594aa	ENSSSCP00045033077
EIF2A-206	ENSSSCT00045047726	3428	556aa	ENSSSCP00045033157
EIF2A-204	ENSSSCT00045047855	3278	506aa	ENSSSCP00045033247

Gene Model

Click here to download ENSSSCG00045027073's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00045027073's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00045027073

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00045027073	sus_scrofa_landrace	ENSSSCP00045033077	93.0976	88.8889	equus_caballus	ENSECAP00000046661	95.3448	91.0345
ENSSSCG00045027073	sus_scrofa_landrace	ENSSSCP00045033077	99.3266	99.3266	sus_scrofa	ENSSSCP00000073972	99.8308	99.8308
ENSSSCG00045027073	sus_scrofa_landrace	ENSSSCP00045033077	95.4545	94.4444	sus_scrofa_usmarc	ENSSSCP00070007647	93.719	92.7273
ENSSSCG00045027073	sus_scrofa_landrace	ENSSSCP00045033077	100	100	sus_scrofa_rongchang	ENSSSCP00030021254	100	100
ENSSSCG00045027073	sus_scrofa_landrace	ENSSSCP00045033077	100	100	sus_scrofa_wuzhishan	ENSSSCP00005024171	99.8319	99.8319
ENSSSCG00045027073	sus_scrofa_landrace	ENSSSCP00045033077	100	100	sus_scrofa_jinhua	ENSSSCP00060039237	100	100
ENSSSCG00045027073	sus_scrofa_landrace	ENSSSCP00045033077	92.4242	89.3939	bos_taurus	ENSBTAP00000061378	92.1141	89.094
ENSSSCG00045027073	sus_scrofa_landrace	ENSSSCP00045033077	100	100	sus_scrofa_bamei	ENSSSCP00050019026	100	100
ENSSSCG00045027073	sus_scrofa_landrace	ENSSSCP00045033077	92.7609	90.2357	ovis_aries_rambouillet	ENSOARP00020005880	94.188	91.6239
ENSSSCG00045027073	sus_scrofa_landrace	ENSSSCP00045033077	99.3266	99.3266	sus_scrofa_berkshire	ENSSSCP00065043088	100	100
ENSSSCG00045027073	sus_scrofa_landrace	ENSSSCP00045033077	99.1582	98.9899	sus_scrofa_hampshire	ENSSSCP00035006074	99.6616	99.4924
ENSSSCG00045027073	sus_scrofa_landrace	ENSSSCP00045033077	100	100	sus_scrofa_meishan	ENSSSCP00040045111	99.8319	99.8319
ENSSSCG00045027073	sus_scrofa_landrace	ENSSSCP00045033077	100	100	sus_scrofa_tibetan	ENSSSCP00015044253	100	100
ENSSSCG00045027073	sus_scrofa_landrace	ENSSSCP00045033077	99.3266	99.3266	sus_scrofa_pietrain	ENSSSCP00055028780	100	100
ENSSSCG00045027073	sus_scrofa_landrace	ENSSSCP00045033077	99.3266	99.3266	sus_scrofa_largewhite	ENSSSCP00025010389	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression