RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00045024246	Gene ID		Accession	-
Symbol	DCP2	Alias	-	Full Name	NA
Status	Confidence	Length	78767 bases	Strand	Minus strand
Position	LUXT01074796.1 : 985410 - 1064176	RNA binding domain	DCP2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00045028855	DCP2	PF05026	2.8e-29	1
ENSSSCP00045028765	DCP2	PF05026	3.3e-29	1
ENSSSCP00045028677	DCP2	PF05026	4.3e-29	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
DCP2-201	ENSSSCT00045041318	1526	478aa	ENSSSCP00045028677
DCP2-202	ENSSSCT00045041441	6176	423aa	ENSSSCP00045028765
DCP2-203	ENSSSCT00045041591	8768	386aa	ENSSSCP00045028855
DCP2-204	ENSSSCT00045041706	8705	439aa	ENSSSCP00045028931

Gene Model

Click here to download ENSSSCG00045024246's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00045024246's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00045024246

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00045024246	sus_scrofa_landrace	ENSSSCP00045028677	84.1004	81.59	equus_caballus	ENSECAP00000067366	87.7729	85.1528
ENSSSCG00045024246	sus_scrofa_landrace	ENSSSCP00045028677	100	100	sus_scrofa	ENSSSCP00000015112	100	100
ENSSSCG00045024246	sus_scrofa_landrace	ENSSSCP00045028677	69.6653	65.8996	sus_scrofa_usmarc	ENSSSCP00070022012	75.8542	71.754
ENSSSCG00045024246	sus_scrofa_landrace	ENSSSCP00045028677	100	100	sus_scrofa_rongchang	ENSSSCP00030035898	100	100
ENSSSCG00045024246	sus_scrofa_landrace	ENSSSCP00045028677	99.7908	99.7908	sus_scrofa_wuzhishan	ENSSSCP00005038065	99.7908	99.7908
ENSSSCG00045024246	sus_scrofa_landrace	ENSSSCP00045028677	99.7908	99.7908	sus_scrofa_jinhua	ENSSSCP00060011828	99.7908	99.7908
ENSSSCG00045024246	sus_scrofa_landrace	ENSSSCP00045028677	84.3096	80.7531	bos_taurus	ENSBTAP00000054783	95.2719	91.253
ENSSSCG00045024246	sus_scrofa_landrace	ENSSSCP00045028677	99.7908	99.7908	sus_scrofa_bamei	ENSSSCP00050035616	99.7908	99.7908
ENSSSCG00045024246	sus_scrofa_landrace	ENSSSCP00045028677	84.5188	81.3808	ovis_aries_rambouillet	ENSOARP00020018534	95.5083	91.9622
ENSSSCG00045024246	sus_scrofa_landrace	ENSSSCP00045028677	99.7908	99.7908	sus_scrofa_berkshire	ENSSSCP00065007717	99.7908	99.7908
ENSSSCG00045024246	sus_scrofa_landrace	ENSSSCP00045028677	100	100	sus_scrofa_hampshire	ENSSSCP00035007556	100	100
ENSSSCG00045024246	sus_scrofa_landrace	ENSSSCP00045028677	99.7908	99.7908	sus_scrofa_meishan	ENSSSCP00040042299	99.7908	99.7908
ENSSSCG00045024246	sus_scrofa_landrace	ENSSSCP00045028677	99.7908	99.7908	sus_scrofa_tibetan	ENSSSCP00015042629	99.7908	99.7908
ENSSSCG00045024246	sus_scrofa_landrace	ENSSSCP00045028677	100	100	sus_scrofa_pietrain	ENSSSCP00055041673	100	100
ENSSSCG00045024246	sus_scrofa_landrace	ENSSSCP00045028677	100	100	sus_scrofa_largewhite	ENSSSCP00025023683	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression