Description

Ensembl ID ENSSSCG00045020709 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 12793 bases Strand Plus strand
Position LUXT01050959.1 : 1892238 - 1905030 RNA binding domain tRNA-synt_2c , tRNA_SAD
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00045024950 tRNA-synt_2c PF01411 1.1e-174 1
ENSSSCP00045024950 tRNA_SAD PF07973 1.8e-10 2
ENSSSCP00045024821 tRNA-synt_2c PF01411 1.2e-174 1
ENSSSCP00045024821 tRNA_SAD PF07973 1.9e-10 2
ENSSSCP00045025024 tRNA-synt_2c PF01411 1.3e-174 1
ENSSSCP00045025024 tRNA_SAD PF07973 1.6e-10 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00045035714 3048 1015aa ENSSSCP00045024821
- ENSSSCT00045035886 3553 985aa ENSSSCP00045024950
- ENSSSCT00045035988 3356 938aa ENSSSCP00045025024

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00045020709sus_scrofa_landraceENSSSCP0004501972559.160342.3664sus_scrofa_landraceENSSSCP0004502482161.083743.7438
ENSSSCG00045020709sus_scrofa_landraceENSSSCP0004500896242.23323.7864sus_scrofa_landraceENSSSCP0004502482117.14299.65517

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00045020709sus_scrofa_landraceENSSSCP0004502482187.487783.0542equus_caballusENSECAP0000002628494.067889.3008
ENSSSCG00045020709sus_scrofa_landraceENSSSCP0004502482199.80399.803sus_scrofaENSSSCP0000005055299.80399.803
ENSSSCG00045020709sus_scrofa_landraceENSSSCP0004502482199.80399.803sus_scrofa_usmarcENSSSCP00070036489100100
ENSSSCG00045020709sus_scrofa_landraceENSSSCP0004502482199.901599.9015sus_scrofa_rongchangENSSSCP0003004322099.901599.9015
ENSSSCG00045020709sus_scrofa_landraceENSSSCP0004502482197.241497.2414sus_scrofa_wuzhishanENSSSCP0000503763699.898899.8988
ENSSSCG00045020709sus_scrofa_landraceENSSSCP0004502482199.901599.9015sus_scrofa_jinhuaENSSSCP0006001247799.901599.9015
ENSSSCG00045020709sus_scrofa_landraceENSSSCP0004502482191.3386.9951bos_taurusENSBTAP0000001823294.303289.8271
ENSSSCG00045020709sus_scrofa_landraceENSSSCP0004502482199.901599.9015sus_scrofa_bameiENSSSCP0005000239699.901599.9015
ENSSSCG00045020709sus_scrofa_landraceENSSSCP0004502482191.921287.1921ovis_aries_rambouilletENSOARP0002003184194.913590.0305
ENSSSCG00045020709sus_scrofa_landraceENSSSCP0004502482110099.9015sus_scrofa_berkshireENSSSCP0006504131110099.9015
ENSSSCG00045020709sus_scrofa_landraceENSSSCP0004502482199.704499.6059sus_scrofa_hampshireENSSSCP0003504628399.802899.7041
ENSSSCG00045020709sus_scrofa_landraceENSSSCP0004502482195.960695.5665sus_scrofa_meishanENSSSCP0004003813598.883298.4772
ENSSSCG00045020709sus_scrofa_landraceENSSSCP0004502482195.960695.5665sus_scrofa_tibetanENSSSCP0001501426698.883298.4772
ENSSSCG00045020709sus_scrofa_landraceENSSSCP0004502482197.339997.3399sus_scrofa_pietrainENSSSCP00055024677100100
ENSSSCG00045020709sus_scrofa_landraceENSSSCP0004502482196.059195.665sus_scrofa_largewhiteENSSSCP0002502521398.984898.5787

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression