RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00045020709 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
12793 bases |
Strand |
Plus strand |
Position |
LUXT01050959.1 : 1892238 - 1905030 |
RNA binding domain |
tRNA-synt_2c , tRNA_SAD |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00045024950 |
tRNA-synt_2c |
PF01411 |
1.1e-174 |
1 |
ENSSSCP00045024950 |
tRNA_SAD |
PF07973 |
1.8e-10 |
2 |
ENSSSCP00045024821 |
tRNA-synt_2c |
PF01411 |
1.2e-174 |
1 |
ENSSSCP00045024821 |
tRNA_SAD |
PF07973 |
1.9e-10 |
2 |
ENSSSCP00045025024 |
tRNA-synt_2c |
PF01411 |
1.3e-174 |
1 |
ENSSSCP00045025024 |
tRNA_SAD |
PF07973 |
1.6e-10 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00045035714 |
3048 |
1015aa |
ENSSSCP00045024821 |
- |
ENSSSCT00045035886 |
3553 |
985aa |
ENSSSCP00045024950 |
- |
ENSSSCT00045035988 |
3356 |
938aa |
ENSSSCP00045025024 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00045020709 | sus_scrofa_landrace | ENSSSCP00045019725 | 59.1603 | 42.3664 | sus_scrofa_landrace | ENSSSCP00045024821 | 61.0837 | 43.7438 |
ENSSSCG00045020709 | sus_scrofa_landrace | ENSSSCP00045008962 | 42.233 | 23.7864 | sus_scrofa_landrace | ENSSSCP00045024821 | 17.1429 | 9.65517 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00045020709 | sus_scrofa_landrace | ENSSSCP00045024821 | 87.4877 | 83.0542 | equus_caballus | ENSECAP00000026284 | 94.0678 | 89.3008 |
ENSSSCG00045020709 | sus_scrofa_landrace | ENSSSCP00045024821 | 99.803 | 99.803 | sus_scrofa | ENSSSCP00000050552 | 99.803 | 99.803 |
ENSSSCG00045020709 | sus_scrofa_landrace | ENSSSCP00045024821 | 99.803 | 99.803 | sus_scrofa_usmarc | ENSSSCP00070036489 | 100 | 100 |
ENSSSCG00045020709 | sus_scrofa_landrace | ENSSSCP00045024821 | 99.9015 | 99.9015 | sus_scrofa_rongchang | ENSSSCP00030043220 | 99.9015 | 99.9015 |
ENSSSCG00045020709 | sus_scrofa_landrace | ENSSSCP00045024821 | 97.2414 | 97.2414 | sus_scrofa_wuzhishan | ENSSSCP00005037636 | 99.8988 | 99.8988 |
ENSSSCG00045020709 | sus_scrofa_landrace | ENSSSCP00045024821 | 99.9015 | 99.9015 | sus_scrofa_jinhua | ENSSSCP00060012477 | 99.9015 | 99.9015 |
ENSSSCG00045020709 | sus_scrofa_landrace | ENSSSCP00045024821 | 91.33 | 86.9951 | bos_taurus | ENSBTAP00000018232 | 94.3032 | 89.8271 |
ENSSSCG00045020709 | sus_scrofa_landrace | ENSSSCP00045024821 | 99.9015 | 99.9015 | sus_scrofa_bamei | ENSSSCP00050002396 | 99.9015 | 99.9015 |
ENSSSCG00045020709 | sus_scrofa_landrace | ENSSSCP00045024821 | 91.9212 | 87.1921 | ovis_aries_rambouillet | ENSOARP00020031841 | 94.9135 | 90.0305 |
ENSSSCG00045020709 | sus_scrofa_landrace | ENSSSCP00045024821 | 100 | 99.9015 | sus_scrofa_berkshire | ENSSSCP00065041311 | 100 | 99.9015 |
ENSSSCG00045020709 | sus_scrofa_landrace | ENSSSCP00045024821 | 99.7044 | 99.6059 | sus_scrofa_hampshire | ENSSSCP00035046283 | 99.8028 | 99.7041 |
ENSSSCG00045020709 | sus_scrofa_landrace | ENSSSCP00045024821 | 95.9606 | 95.5665 | sus_scrofa_meishan | ENSSSCP00040038135 | 98.8832 | 98.4772 |
ENSSSCG00045020709 | sus_scrofa_landrace | ENSSSCP00045024821 | 95.9606 | 95.5665 | sus_scrofa_tibetan | ENSSSCP00015014266 | 98.8832 | 98.4772 |
ENSSSCG00045020709 | sus_scrofa_landrace | ENSSSCP00045024821 | 97.3399 | 97.3399 | sus_scrofa_pietrain | ENSSSCP00055024677 | 100 | 100 |
ENSSSCG00045020709 | sus_scrofa_landrace | ENSSSCP00045024821 | 96.0591 | 95.665 | sus_scrofa_largewhite | ENSSSCP00025025213 | 98.9848 | 98.5787 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |