| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00045019935 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
407246 bases |
Strand |
Minus strand |
| Position |
LUXT01078455.1 : 2051605 - 2458850 |
RNA binding domain |
FDX-ACB , tRNA-synt_2d |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00045023733 |
FDX-ACB |
PF03147 |
1.3e-23 |
1 |
| ENSSSCP00045023733 |
tRNA-synt_2d |
PF01409 |
1.2e-48 |
2 |
| ENSSSCP00045023733 |
tRNA-synt_2d |
PF01409 |
1.2e-48 |
3 |
| ENSSSCP00045023688 |
FDX-ACB |
PF03147 |
1.5e-23 |
1 |
| ENSSSCP00045023688 |
tRNA-synt_2d |
PF01409 |
1.3e-48 |
2 |
| ENSSSCP00045023688 |
tRNA-synt_2d |
PF01409 |
1.3e-48 |
3 |
| ENSSSCP00045023782 |
FDX-ACB |
PF03147 |
1.4e-10 |
1 |
| ENSSSCP00045023782 |
tRNA-synt_2d |
PF01409 |
8e-49 |
2 |
| ENSSSCP00045023782 |
tRNA-synt_2d |
PF01409 |
8e-49 |
3 |
| ENSSSCP00045023542 |
FDX-ACB |
PF03147 |
2.1e-10 |
1 |
| ENSSSCP00045023542 |
tRNA-synt_2d |
PF01409 |
9.6e-49 |
2 |
| ENSSSCP00045023542 |
tRNA-synt_2d |
PF01409 |
9.6e-49 |
3 |
| ENSSSCP00045023638 |
FDX-ACB |
PF03147 |
2.4e-10 |
1 |
| ENSSSCP00045023638 |
tRNA-synt_2d |
PF01409 |
7.8e-49 |
2 |
| ENSSSCP00045023638 |
tRNA-synt_2d |
PF01409 |
7.8e-49 |
3 |
| ENSSSCP00045023592 |
FDX-ACB |
PF03147 |
2.5e-10 |
1 |
| ENSSSCP00045023592 |
tRNA-synt_2d |
PF01409 |
8e-49 |
2 |
| ENSSSCP00045023592 |
tRNA-synt_2d |
PF01409 |
8e-49 |
3 |
| ENSSSCP00045023847 |
FDX-ACB |
PF03147 |
3.1e-10 |
1 |
| ENSSSCP00045023847 |
tRNA-synt_2d |
PF01409 |
9.7e-49 |
2 |
| ENSSSCP00045023847 |
tRNA-synt_2d |
PF01409 |
9.7e-49 |
3 |
| ENSSSCP00045023878 |
FDX-ACB |
PF03147 |
3.3e-10 |
1 |
| ENSSSCP00045023878 |
tRNA-synt_2d |
PF01409 |
6.7e-49 |
2 |
| ENSSSCP00045023878 |
tRNA-synt_2d |
PF01409 |
6.7e-49 |
3 |
| ENSSSCP00045023913 |
tRNA-synt_2d |
PF01409 |
8.3e-49 |
1 |
| ENSSSCP00045023913 |
tRNA-synt_2d |
PF01409 |
8.3e-49 |
2 |
| ENSSSCP00045023942 |
tRNA-synt_2d |
PF01409 |
4.4e-32 |
1 |
| ENSSSCP00045023942 |
tRNA-synt_2d |
PF01409 |
4.4e-32 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00045033948 |
2011 |
455aa |
ENSSSCP00045023542 |
| - |
ENSSSCT00045034010 |
1936 |
430aa |
ENSSSCP00045023592 |
| - |
ENSSSCT00045034065 |
2062 |
427aa |
ENSSSCP00045023638 |
| - |
ENSSSCT00045034148 |
1677 |
478aa |
ENSSSCP00045023688 |
| - |
ENSSSCT00045034223 |
1800 |
471aa |
ENSSSCP00045023733 |
| - |
ENSSSCT00045034293 |
5653 |
431aa |
ENSSSCP00045023782 |
| - |
ENSSSCT00045034393 |
1772 |
454aa |
ENSSSCP00045023847 |
| - |
ENSSSCT00045034441 |
1977 |
411aa |
ENSSSCP00045023878 |
| - |
ENSSSCT00045034481 |
1897 |
435aa |
ENSSSCP00045023913 |
| - |
ENSSSCT00045034517 |
3483 |
414aa |
ENSSSCP00045023942 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00045019935 | sus_scrofa_landrace | ENSSSCP00045006209 | 30.24 | 15.68 | sus_scrofa_landrace | ENSSSCP00045023688 | 39.5397 | 20.5021 |
| ENSSSCG00045019935 | sus_scrofa_landrace | ENSSSCP00045029385 | 25.4335 | 15.2216 | sus_scrofa_landrace | ENSSSCP00045023688 | 27.6151 | 16.5272 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00045019935 | sus_scrofa_landrace | ENSSSCP00045023688 | 79.0795 | 73.2218 | equus_caballus | ENSECAP00000037168 | 59.434 | 55.0314 |
| ENSSSCG00045019935 | sus_scrofa_landrace | ENSSSCP00045023688 | 91.841 | 91.841 | sus_scrofa | ENSSSCP00000049963 | 99.7727 | 99.7727 |
| ENSSSCG00045019935 | sus_scrofa_landrace | ENSSSCP00045023688 | 88.9121 | 88.4937 | sus_scrofa_usmarc | ENSSSCP00070002571 | 73.0241 | 72.6804 |
| ENSSSCG00045019935 | sus_scrofa_landrace | ENSSSCP00045023688 | 99.7908 | 99.7908 | sus_scrofa_rongchang | ENSSSCP00030008026 | 99.7908 | 99.7908 |
| ENSSSCG00045019935 | sus_scrofa_landrace | ENSSSCP00045023688 | 80.7531 | 80.7531 | sus_scrofa_wuzhishan | ENSSSCP00005032437 | 89.5592 | 89.5592 |
| ENSSSCG00045019935 | sus_scrofa_landrace | ENSSSCP00045023688 | 99.7908 | 99.7908 | sus_scrofa_jinhua | ENSSSCP00060000635 | 99.7908 | 99.7908 |
| ENSSSCG00045019935 | sus_scrofa_landrace | ENSSSCP00045023688 | 85.3557 | 80.7531 | bos_taurus | ENSBTAP00000057274 | 91.4798 | 86.5471 |
| ENSSSCG00045019935 | sus_scrofa_landrace | ENSSSCP00045023688 | 92.0502 | 92.0502 | sus_scrofa_bamei | ENSSSCP00050037952 | 92.6316 | 92.6316 |
| ENSSSCG00045019935 | sus_scrofa_landrace | ENSSSCP00045023688 | 85.5648 | 81.59 | ovis_aries_rambouillet | ENSOARP00020032546 | 91.9101 | 87.6404 |
| ENSSSCG00045019935 | sus_scrofa_landrace | ENSSSCP00045023688 | 76.569 | 75.1046 | sus_scrofa_berkshire | ENSSSCP00065018597 | 80.0875 | 78.5558 |
| ENSSSCG00045019935 | sus_scrofa_landrace | ENSSSCP00045023688 | 99.7908 | 99.7908 | sus_scrofa_hampshire | ENSSSCP00035019680 | 99.7908 | 99.7908 |
| ENSSSCG00045019935 | sus_scrofa_landrace | ENSSSCP00045023688 | 92.0502 | 92.0502 | sus_scrofa_meishan | ENSSSCP00040044809 | 93.4183 | 93.4183 |
| ENSSSCG00045019935 | sus_scrofa_landrace | ENSSSCP00045023688 | 88.9121 | 88.4937 | sus_scrofa_tibetan | ENSSSCP00015003836 | 86.0324 | 85.6275 |
| ENSSSCG00045019935 | sus_scrofa_landrace | ENSSSCP00045023688 | 99.7908 | 99.7908 | sus_scrofa_pietrain | ENSSSCP00055035006 | 99.7908 | 99.7908 |
| ENSSSCG00045019935 | sus_scrofa_landrace | ENSSSCP00045023688 | 88.9121 | 88.4937 | sus_scrofa_largewhite | ENSSSCP00025031551 | 73.0241 | 72.6804 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
