RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00045017067	Gene ID		Accession	-
Symbol	EIF3B	Alias	-	Full Name	NA
Status	Confidence	Length	20438 bases	Strand	Minus strand
Position	LUXT01008712.1 : 173860 - 194297	RNA binding domain	eIF2A , RRM_1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00045020118	eIF2A	PF08662	3.9e-72	1
ENSSSCP00045020118	RRM_1	PF00076	9e-07	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
EIF3B-201	ENSSSCT00045029054	3847	784aa	ENSSSCP00045020118

Gene Model

Click here to download ENSSSCG00045017067's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00045017067's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00045017067

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00045017067	sus_scrofa_landrace	ENSSSCP00045020118	91.0714	88.3929	equus_caballus	ENSECAP00000048339	84	81.5294
ENSSSCG00045017067	sus_scrofa_landrace	ENSSSCP00045020118	100	100	sus_scrofa	ENSSSCP00000051116	100	100
ENSSSCG00045017067	sus_scrofa_landrace	ENSSSCP00045020118	100	100	sus_scrofa_usmarc	ENSSSCP00070016076	100	100
ENSSSCG00045017067	sus_scrofa_landrace	ENSSSCP00045020118	96.8112	96.301	sus_scrofa_rongchang	ENSSSCP00030041041	94.6384	94.1396
ENSSSCG00045017067	sus_scrofa_landrace	ENSSSCP00045020118	61.352	61.352	sus_scrofa_wuzhishan	ENSSSCP00005038727	100	100
ENSSSCG00045017067	sus_scrofa_landrace	ENSSSCP00045020118	100	100	sus_scrofa_jinhua	ENSSSCP00060009570	100	100
ENSSSCG00045017067	sus_scrofa_landrace	ENSSSCP00045020118	96.301	95.1531	bos_taurus	ENSBTAP00000009832	96.056	94.9109
ENSSSCG00045017067	sus_scrofa_landrace	ENSSSCP00045020118	100	100	sus_scrofa_bamei	ENSSSCP00050012216	100	100
ENSSSCG00045017067	sus_scrofa_landrace	ENSSSCP00045020118	96.0459	94.2602	ovis_aries_rambouillet	ENSOARP00020018034	95.5584	93.7817
ENSSSCG00045017067	sus_scrofa_landrace	ENSSSCP00045020118	100	100	sus_scrofa_berkshire	ENSSSCP00065017870	100	100
ENSSSCG00045017067	sus_scrofa_landrace	ENSSSCP00045020118	100	100	sus_scrofa_hampshire	ENSSSCP00035012115	100	100
ENSSSCG00045017067	sus_scrofa_landrace	ENSSSCP00045020118	100	100	sus_scrofa_meishan	ENSSSCP00040006464	100	100
ENSSSCG00045017067	sus_scrofa_landrace	ENSSSCP00045020118	100	100	sus_scrofa_tibetan	ENSSSCP00015005485	100	100
ENSSSCG00045017067	sus_scrofa_landrace	ENSSSCP00045020118	100	100	sus_scrofa_pietrain	ENSSSCP00055014895	100	100
ENSSSCG00045017067	sus_scrofa_landrace	ENSSSCP00045020118	100	100	sus_scrofa_largewhite	ENSSSCP00025041081	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression