| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00045015861 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
166544 bases |
Strand |
Minus strand |
| Position |
LUXT01081403.1 : 231270 - 397813 |
RNA binding domain |
tRNA-synt_1g , tRNA-synt_1 , Anticodon_1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00045018629 |
tRNA-synt_1g |
PF09334 |
3.5e-28 |
1 |
| ENSSSCP00045018629 |
tRNA-synt_1g |
PF09334 |
3.5e-28 |
2 |
| ENSSSCP00045018629 |
tRNA-synt_1 |
PF00133 |
9.5e-39 |
3 |
| ENSSSCP00045018629 |
tRNA-synt_1 |
PF00133 |
9.5e-39 |
4 |
| ENSSSCP00045018629 |
Anticodon_1 |
PF08264 |
2.9e-10 |
5 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00045026957 |
3716 |
804aa |
ENSSSCP00045018629 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00045015861 | sus_scrofa_landrace | ENSSSCP00045048987 | 19.1045 | 9.92537 | sus_scrofa_landrace | ENSSSCP00045018629 | 31.8408 | 16.5423 |
| ENSSSCG00045015861 | sus_scrofa_landrace | ENSSSCP00045045422 | 19.8103 | 8.74605 | sus_scrofa_landrace | ENSSSCP00045018629 | 23.3831 | 10.3234 |
| ENSSSCG00045015861 | sus_scrofa_landrace | ENSSSCP00045038045 | 19.5984 | 8.99598 | sus_scrofa_landrace | ENSSSCP00045018629 | 30.3483 | 13.9303 |
| ENSSSCG00045015861 | sus_scrofa_landrace | ENSSSCP00045048216 | 24.7646 | 13.5593 | sus_scrofa_landrace | ENSSSCP00045018629 | 32.7114 | 17.9104 |
| ENSSSCG00045015861 | sus_scrofa_landrace | ENSSSCP00045010137 | 18.3835 | 8.79556 | sus_scrofa_landrace | ENSSSCP00045018629 | 28.8557 | 13.806 |
| ENSSSCG00045015861 | sus_scrofa_landrace | ENSSSCP00045006625 | 23.7374 | 12.2896 | sus_scrofa_landrace | ENSSSCP00045018629 | 17.5373 | 9.0796 |
| ENSSSCG00045015861 | sus_scrofa_landrace | ENSSSCP00045040843 | 22.8016 | 11.5542 | sus_scrofa_landrace | ENSSSCP00045018629 | 27.7363 | 14.0547 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00045015861 | sus_scrofa_landrace | ENSSSCP00045018629 | 91.9154 | 87.1891 | equus_caballus | ENSECAP00000021951 | 75.178 | 71.3123 |
| ENSSSCG00045015861 | sus_scrofa_landrace | ENSSSCP00045018629 | 99.7512 | 99.7512 | sus_scrofa | ENSSSCP00000073491 | 88.9135 | 88.9135 |
| ENSSSCG00045015861 | sus_scrofa_landrace | ENSSSCP00045018629 | 100 | 100 | sus_scrofa_usmarc | ENSSSCP00070013657 | 91.5718 | 91.5718 |
| ENSSSCG00045015861 | sus_scrofa_landrace | ENSSSCP00045018629 | 99.8756 | 99.8756 | sus_scrofa_rongchang | ENSSSCP00030045194 | 89.0244 | 89.0244 |
| ENSSSCG00045015861 | sus_scrofa_landrace | ENSSSCP00045018629 | 99.2537 | 99.005 | sus_scrofa_wuzhishan | ENSSSCP00005042128 | 88.6667 | 88.4444 |
| ENSSSCG00045015861 | sus_scrofa_landrace | ENSSSCP00045018629 | 99.6269 | 99.6269 | sus_scrofa_jinhua | ENSSSCP00060007252 | 88.8027 | 88.8027 |
| ENSSSCG00045015861 | sus_scrofa_landrace | ENSSSCP00045018629 | 94.403 | 90.5473 | bos_taurus | ENSBTAP00000052354 | 84.0532 | 80.6202 |
| ENSSSCG00045015861 | sus_scrofa_landrace | ENSSSCP00045018629 | 99.6269 | 99.6269 | sus_scrofa_bamei | ENSSSCP00050037371 | 88.8027 | 88.8027 |
| ENSSSCG00045015861 | sus_scrofa_landrace | ENSSSCP00045018629 | 94.403 | 90.5473 | ovis_aries_rambouillet | ENSOARP00020033015 | 84.0532 | 80.6202 |
| ENSSSCG00045015861 | sus_scrofa_landrace | ENSSSCP00045018629 | 99.6269 | 99.5025 | sus_scrofa_berkshire | ENSSSCP00065047898 | 88.8027 | 88.6918 |
| ENSSSCG00045015861 | sus_scrofa_landrace | ENSSSCP00045018629 | 99.6269 | 99.5025 | sus_scrofa_hampshire | ENSSSCP00035044706 | 88.8027 | 88.6918 |
| ENSSSCG00045015861 | sus_scrofa_landrace | ENSSSCP00045018629 | 99.8756 | 99.8756 | sus_scrofa_meishan | ENSSSCP00040026718 | 89.0244 | 89.0244 |
| ENSSSCG00045015861 | sus_scrofa_landrace | ENSSSCP00045018629 | 99.7512 | 99.7512 | sus_scrofa_tibetan | ENSSSCP00015024314 | 88.9135 | 88.9135 |
| ENSSSCG00045015861 | sus_scrofa_landrace | ENSSSCP00045018629 | 99.6269 | 99.6269 | sus_scrofa_pietrain | ENSSSCP00055021164 | 88.8027 | 88.8027 |
| ENSSSCG00045015861 | sus_scrofa_landrace | ENSSSCP00045018629 | 99.7512 | 99.7512 | sus_scrofa_largewhite | ENSSSCP00025026571 | 88.9135 | 88.9135 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
