Description

Ensembl ID ENSSSCG00045012636 Gene ID 100154456 Accession -
Symbol RPL8 Alias - Full Name ribosomal protein L8
Status Confidence Length 4071 bases Strand Minus strand
Position LUXT01039263.1 : 97466 - 101536 RNA binding domain Ribosomal_L2 , Ribosomal_L2_C
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00045014867 Ribosomal_L2 PF00181 5.4e-19 1
ENSSSCP00045014867 Ribosomal_L2_C PF03947 2.6e-40 2
ENSSSCP00045014891 Ribosomal_L2 PF00181 5.8e-19 1
ENSSSCP00045014891 Ribosomal_L2_C PF03947 9e-27 2
ENSSSCP00045014827 Ribosomal_L2 PF00181 5.8e-19 1
ENSSSCP00045014827 Ribosomal_L2_C PF03947 8.2e-46 2
ENSSSCP00045014838 Ribosomal_L2 PF00181 5.8e-19 1
ENSSSCP00045014838 Ribosomal_L2_C PF03947 8.2e-46 2
ENSSSCP00045014905 Ribosomal_L2_C PF03947 3.8e-21 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
RPL8-201 ENSSSCT00045021559 2335 257aa ENSSSCP00045014827
RPL8-202 ENSSSCT00045021576 927 257aa ENSSSCP00045014838
RPL8-203 ENSSSCT00045021621 759 252aa ENSSSCP00045014867
RPL8-204 ENSSSCT00045021653 678 225aa ENSSSCP00045014891
RPL8-205 ENSSSCT00045021671 447 148aa ENSSSCP00045014905

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00045012636sus_scrofa_landraceENSSSCP0004504069778.620769.6552sus_scrofa_landraceENSSSCP0004501482744.35839.2996
ENSSSCG00045012636sus_scrofa_landraceENSSSCP0004503927028.758217.3203sus_scrofa_landraceENSSSCP0004501482734.241220.6226

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00045012636sus_scrofa_landraceENSSSCP0004501482787.937784.8249equus_caballusENSECAP0000004251869.538567.0769
ENSSSCG00045012636sus_scrofa_landraceENSSSCP0004501482789.105187.1595sus_scrofaENSSSCP0000006923071.786870.2194
ENSSSCG00045012636sus_scrofa_landraceENSSSCP00045014827100100sus_scrofa_usmarcENSSSCP00070030353100100
ENSSSCG00045012636sus_scrofa_landraceENSSSCP00045014827100100sus_scrofa_rongchangENSSSCP00030000607100100
ENSSSCG00045012636sus_scrofa_landraceENSSSCP0004501482782.101282.1012sus_scrofa_wuzhishanENSSSCP0000503249885.080685.0806
ENSSSCG00045012636sus_scrofa_landraceENSSSCP00045014827100100sus_scrofa_jinhuaENSSSCP00060005530100100
ENSSSCG00045012636sus_scrofa_landraceENSSSCP00045014827100100bos_taurusENSBTAP00000037200100100
ENSSSCG00045012636sus_scrofa_landraceENSSSCP0004501482796.887296.1089bos_taurusENSBTAP0000000463096.887296.1089
ENSSSCG00045012636sus_scrofa_landraceENSSSCP00045014827100100sus_scrofa_bameiENSSSCP00050030537100100
ENSSSCG00045012636sus_scrofa_landraceENSSSCP00045014827100100ovis_aries_rambouilletENSOARP00020004359100100
ENSSSCG00045012636sus_scrofa_landraceENSSSCP00045014827100100sus_scrofa_berkshireENSSSCP00065008576100100
ENSSSCG00045012636sus_scrofa_landraceENSSSCP00045014827100100sus_scrofa_hampshireENSSSCP00035029264100100
ENSSSCG00045012636sus_scrofa_landraceENSSSCP00045014827100100sus_scrofa_meishanENSSSCP00040024325100100
ENSSSCG00045012636sus_scrofa_landraceENSSSCP00045014827100100sus_scrofa_tibetanENSSSCP00015002825100100
ENSSSCG00045012636sus_scrofa_landraceENSSSCP0004501482789.105187.1595sus_scrofa_pietrainENSSSCP0005503970171.786870.2194
ENSSSCG00045012636sus_scrofa_landraceENSSSCP0004501482789.105187.1595sus_scrofa_largewhiteENSSSCP0002502971171.786870.2194

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression