RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00045008607	Gene ID	100156579	Accession	-
Symbol	NEMF	Alias	-	Full Name	nuclear export mediator factor
Status	Confidence	Length	48471 bases	Strand	Minus strand
Position	LUXT01001371.1 : 236138 - 284608	RNA binding domain	NFACT-R_1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00045010073	NFACT-R_1	PF05670	1.4e-34	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
NEMF-201	ENSSSCT00045014529	5152	1076aa	ENSSSCP00045010073

Gene Model

Click here to download ENSSSCG00045008607's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00045008607's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00045008607

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00045008607	sus_scrofa_landrace	ENSSSCP00045010073	97.3978	94.8885	equus_caballus	ENSECAP00000084712	90.8146	88.4749
ENSSSCG00045008607	sus_scrofa_landrace	ENSSSCP00045010073	100	100	sus_scrofa	ENSSSCP00000005390	100	100
ENSSSCG00045008607	sus_scrofa_landrace	ENSSSCP00045010073	97.2119	96.2825	sus_scrofa_usmarc	ENSSSCP00070001695	93.3095	92.4175
ENSSSCG00045008607	sus_scrofa_landrace	ENSSSCP00045010073	99.9071	99.9071	sus_scrofa_rongchang	ENSSSCP00030043407	99.9071	99.9071
ENSSSCG00045008607	sus_scrofa_landrace	ENSSSCP00045010073	99.9071	99.9071	sus_scrofa_wuzhishan	ENSSSCP00005020462	100	100
ENSSSCG00045008607	sus_scrofa_landrace	ENSSSCP00045010073	100	100	sus_scrofa_jinhua	ENSSSCP00060004554	100	100
ENSSSCG00045008607	sus_scrofa_landrace	ENSSSCP00045010073	96.5613	94.2379	bos_taurus	ENSBTAP00000057131	95.7604	93.4562
ENSSSCG00045008607	sus_scrofa_landrace	ENSSSCP00045010073	100	100	sus_scrofa_bamei	ENSSSCP00050042007	100	100
ENSSSCG00045008607	sus_scrofa_landrace	ENSSSCP00045010073	98.0483	96.0967	ovis_aries_rambouillet	ENSOARP00020027225	97.9573	96.0074
ENSSSCG00045008607	sus_scrofa_landrace	ENSSSCP00045010073	100	100	sus_scrofa_berkshire	ENSSSCP00065036570	100	100
ENSSSCG00045008607	sus_scrofa_landrace	ENSSSCP00045010073	100	100	sus_scrofa_hampshire	ENSSSCP00035009802	100	100
ENSSSCG00045008607	sus_scrofa_landrace	ENSSSCP00045010073	100	100	sus_scrofa_meishan	ENSSSCP00040004468	100	100
ENSSSCG00045008607	sus_scrofa_landrace	ENSSSCP00045010073	100	100	sus_scrofa_tibetan	ENSSSCP00015014233	100	100
ENSSSCG00045008607	sus_scrofa_landrace	ENSSSCP00045010073	100	100	sus_scrofa_pietrain	ENSSSCP00055017145	100	100
ENSSSCG00045008607	sus_scrofa_landrace	ENSSSCP00045010073	100	100	sus_scrofa_largewhite	ENSSSCP00025041371	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression