| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00045003531 | Gene ID |
|
Accession |
- |
| Symbol |
RBM23 |
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
15722 bases |
Strand |
Plus strand |
| Position |
LUXT01019631.1 : 661754 - 677475 |
RNA binding domain |
RRM_1 , RBM39linker |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00045003876 |
RRM_1 |
PF00076 |
8.7e-35 |
1 |
| ENSSSCP00045003876 |
RRM_1 |
PF00076 |
8.7e-35 |
2 |
| ENSSSCP00045003876 |
RBM39linker |
PF15519 |
1.8e-12 |
3 |
| ENSSSCP00045003880 |
RRM_1 |
PF00076 |
8.8e-35 |
1 |
| ENSSSCP00045003880 |
RRM_1 |
PF00076 |
8.8e-35 |
2 |
| ENSSSCP00045003880 |
RBM39linker |
PF15519 |
1.7e-12 |
3 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| RBM23-201 |
ENSSSCT00045005787 |
7000 |
429aa |
ENSSSCP00045003876 |
| RBM23-202 |
ENSSSCT00045005795 |
6946 |
411aa |
ENSSSCP00045003880 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045022736 | 24.557 | 15.1899 | sus_scrofa_landrace | ENSSSCP00045003876 | 22.6107 | 13.986 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045019165 | 26.2873 | 15.7182 | sus_scrofa_landrace | ENSSSCP00045003876 | 22.6107 | 13.5198 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045019359 | 26.8493 | 16.4384 | sus_scrofa_landrace | ENSSSCP00045003876 | 22.8438 | 13.986 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045014235 | 59.0476 | 48.7619 | sus_scrofa_landrace | ENSSSCP00045003876 | 72.2611 | 59.6737 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045000158 | 22.7882 | 10.992 | sus_scrofa_landrace | ENSSSCP00045003876 | 19.8135 | 9.55711 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045032843 | 19.6793 | 10.6414 | sus_scrofa_landrace | ENSSSCP00045003876 | 31.4685 | 17.0163 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045037809 | 21.3445 | 11.7647 | sus_scrofa_landrace | ENSSSCP00045003876 | 29.6037 | 16.317 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045032536 | 28.2051 | 16.0256 | sus_scrofa_landrace | ENSSSCP00045003876 | 10.2564 | 5.82751 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045031072 | 30.3226 | 17.4194 | sus_scrofa_landrace | ENSSSCP00045003876 | 10.9557 | 6.29371 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045007976 | 17.2652 | 8.9779 | sus_scrofa_landrace | ENSSSCP00045003876 | 29.1375 | 15.1515 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045044336 | 20.892 | 12.4413 | sus_scrofa_landrace | ENSSSCP00045003876 | 20.7459 | 12.3543 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045047078 | 25.7218 | 15.2231 | sus_scrofa_landrace | ENSSSCP00045003876 | 22.8438 | 13.5198 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045043107 | 34.8178 | 19.8381 | sus_scrofa_landrace | ENSSSCP00045003876 | 20.0466 | 11.4219 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045025937 | 27.6836 | 16.1017 | sus_scrofa_landrace | ENSSSCP00045003876 | 22.8438 | 13.2867 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045004988 | 21.576 | 10.6942 | sus_scrofa_landrace | ENSSSCP00045003876 | 26.8065 | 13.2867 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045046105 | 15.3846 | 8.97436 | sus_scrofa_landrace | ENSSSCP00045003876 | 13.986 | 8.15851 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045006663 | 23.7467 | 11.8734 | sus_scrofa_landrace | ENSSSCP00045003876 | 20.979 | 10.4895 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045011102 | 24.7678 | 11.1455 | sus_scrofa_landrace | ENSSSCP00045003876 | 18.648 | 8.39161 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045018636 | 23.2295 | 13.5977 | sus_scrofa_landrace | ENSSSCP00045003876 | 19.1142 | 11.1888 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045039256 | 34.7059 | 21.7647 | sus_scrofa_landrace | ENSSSCP00045003876 | 13.7529 | 8.62471 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045021694 | 25 | 15.7216 | sus_scrofa_landrace | ENSSSCP00045003876 | 22.6107 | 14.2191 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045042678 | 13.5048 | 7.50268 | sus_scrofa_landrace | ENSSSCP00045003876 | 29.3706 | 16.317 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045030199 | 25.9887 | 15.8192 | sus_scrofa_landrace | ENSSSCP00045003876 | 21.4452 | 13.0536 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045041519 | 26.7956 | 15.1934 | sus_scrofa_landrace | ENSSSCP00045003876 | 22.6107 | 12.8205 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045044132 | 27.8746 | 15.6794 | sus_scrofa_landrace | ENSSSCP00045003876 | 18.648 | 10.4895 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045030829 | 23.0952 | 13.5714 | sus_scrofa_landrace | ENSSSCP00045003876 | 22.6107 | 13.2867 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045021734 | 27.8912 | 13.6054 | sus_scrofa_landrace | ENSSSCP00045003876 | 19.1142 | 9.32401 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045014821 | 23.6364 | 12.7273 | sus_scrofa_landrace | ENSSSCP00045003876 | 18.1818 | 9.79021 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045032615 | 26.4901 | 12.5828 | sus_scrofa_landrace | ENSSSCP00045003876 | 18.648 | 8.85781 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045048304 | 32.6923 | 18.2692 | sus_scrofa_landrace | ENSSSCP00045003876 | 7.92541 | 4.4289 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045001127 | 30.9524 | 19.0476 | sus_scrofa_landrace | ENSSSCP00045003876 | 6.06061 | 3.7296 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045017586 | 24.0122 | 13.9818 | sus_scrofa_landrace | ENSSSCP00045003876 | 18.4149 | 10.7226 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045032357 | 27.5148 | 15.3846 | sus_scrofa_landrace | ENSSSCP00045003876 | 21.6783 | 12.1212 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045043792 | 24.9322 | 14.6341 | sus_scrofa_landrace | ENSSSCP00045003876 | 21.4452 | 12.5874 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045003876 | 96.7366 | 95.1049 | equus_caballus | ENSECAP00000052552 | 92.4276 | 90.8686 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045003876 | 100 | 100 | sus_scrofa | ENSSSCP00000035936 | 100 | 100 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045003876 | 99.7669 | 99.0676 | sus_scrofa_rongchang | ENSSSCP00030044748 | 98.8453 | 98.1524 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045003876 | 100 | 99.5338 | sus_scrofa_wuzhishan | ENSSSCP00005005706 | 96.4045 | 95.9551 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045003876 | 94.4056 | 92.5408 | bos_taurus | ENSBTAP00000060316 | 87.2845 | 85.5603 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045003876 | 99.7669 | 99.0676 | sus_scrofa_bamei | ENSSSCP00050020959 | 98.8453 | 98.1524 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045003876 | 91.6084 | 86.9464 | ovis_aries_rambouillet | ENSOARP00020024263 | 61.5023 | 58.3725 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045003876 | 100 | 99.7669 | sus_scrofa_hampshire | ENSSSCP00035029066 | 96.4045 | 96.1798 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045003876 | 99.7669 | 99.0676 | sus_scrofa_meishan | ENSSSCP00040017487 | 98.8453 | 98.1524 |
| ENSSSCG00045003531 | sus_scrofa_landrace | ENSSSCP00045003876 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055023792 | 100 | 100 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
