| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00045003135 | Gene ID |
|
Accession |
- |
| Symbol |
STRBP |
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
149958 bases |
Strand |
Minus strand |
| Position |
LUXT01005705.1 : 336694 - 486651 |
RNA binding domain |
dsrm , DZF |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00045003643 |
dsrm |
PF00035 |
1.2e-24 |
1 |
| ENSSSCP00045003643 |
dsrm |
PF00035 |
1.2e-24 |
2 |
| ENSSSCP00045003643 |
DZF |
PF07528 |
1.7e-26 |
3 |
| ENSSSCP00045003643 |
DZF |
PF07528 |
1.7e-26 |
4 |
| ENSSSCP00045003609 |
dsrm |
PF00035 |
1.4e-24 |
1 |
| ENSSSCP00045003609 |
dsrm |
PF00035 |
1.4e-24 |
2 |
| ENSSSCP00045003609 |
DZF |
PF07528 |
1e-79 |
3 |
| ENSSSCP00045003668 |
dsrm |
PF00035 |
1.8e-24 |
1 |
| ENSSSCP00045003668 |
dsrm |
PF00035 |
1.8e-24 |
2 |
| ENSSSCP00045003668 |
DZF |
PF07528 |
4.5e-56 |
3 |
| ENSSSCP00045003668 |
DZF |
PF07528 |
4.5e-56 |
4 |
| ENSSSCP00045003692 |
dsrm |
PF00035 |
1.8e-24 |
1 |
| ENSSSCP00045003692 |
dsrm |
PF00035 |
1.8e-24 |
2 |
| ENSSSCP00045003692 |
DZF |
PF07528 |
9e-80 |
3 |
| ENSSSCP00045003562 |
dsrm |
PF00035 |
1.8e-24 |
1 |
| ENSSSCP00045003562 |
dsrm |
PF00035 |
1.8e-24 |
2 |
| ENSSSCP00045003562 |
DZF |
PF07528 |
9e-80 |
3 |
| ENSSSCP00045003674 |
dsrm |
PF00035 |
1.9e-24 |
1 |
| ENSSSCP00045003674 |
dsrm |
PF00035 |
1.9e-24 |
2 |
| ENSSSCP00045003674 |
DZF |
PF07528 |
9.2e-80 |
3 |
| ENSSSCP00045003658 |
dsrm |
PF00035 |
2e-24 |
1 |
| ENSSSCP00045003658 |
dsrm |
PF00035 |
2e-24 |
2 |
| ENSSSCP00045003658 |
DZF |
PF07528 |
9.8e-80 |
3 |
| ENSSSCP00045003548 |
dsrm |
PF00035 |
2.1e-24 |
1 |
| ENSSSCP00045003548 |
dsrm |
PF00035 |
2.1e-24 |
2 |
| ENSSSCP00045003548 |
DZF |
PF07528 |
1e-79 |
3 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| STRBP-202 |
ENSSSCT00045005328 |
3794 |
678aa |
ENSSSCP00045003548 |
| STRBP-201 |
ENSSSCT00045005345 |
2791 |
648aa |
ENSSSCP00045003562 |
| STRBP-205 |
ENSSSCT00045005399 |
6212 |
647aa |
ENSSSCP00045003609 |
| STRBP-204 |
ENSSSCT00045005449 |
5878 |
558aa |
ENSSSCP00045003643 |
| STRBP-203 |
ENSSSCT00045005469 |
5891 |
672aa |
ENSSSCP00045003658 |
| STRBP-206 |
ENSSSCT00045005484 |
3111 |
640aa |
ENSSSCP00045003668 |
| STRBP-207 |
ENSSSCT00045005495 |
1968 |
655aa |
ENSSSCP00045003674 |
| STRBP-208 |
ENSSSCT00045005518 |
5559 |
647aa |
ENSSSCP00045003692 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045030003 | 54.3595 | 43.7029 | sus_scrofa_landrace | ENSSSCP00045003548 | 74.4838 | 59.882 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045005756 | 17.851 | 7.27903 | sus_scrofa_landrace | ENSSSCP00045003548 | 15.1917 | 6.19469 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045040889 | 14.0575 | 7.02875 | sus_scrofa_landrace | ENSSSCP00045003548 | 6.48968 | 3.24484 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045019648 | 23.8806 | 17.5124 | sus_scrofa_landrace | ENSSSCP00045003548 | 35.3982 | 25.9587 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045014054 | 7.59494 | 3.00633 | sus_scrofa_landrace | ENSSSCP00045003548 | 7.07965 | 2.80236 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045034148 | 17.8761 | 9.55752 | sus_scrofa_landrace | ENSSSCP00045003548 | 14.8968 | 7.9646 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045029358 | 21.3439 | 9.68379 | sus_scrofa_landrace | ENSSSCP00045003548 | 15.9292 | 7.22714 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045000813 | 12.5683 | 6.8306 | sus_scrofa_landrace | ENSSSCP00045003548 | 6.78466 | 3.68732 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045042495 | 15.4545 | 7.27273 | sus_scrofa_landrace | ENSSSCP00045003548 | 17.5516 | 8.25959 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045003772 | 5.96798 | 2.03785 | sus_scrofa_landrace | ENSSSCP00045003548 | 6.0472 | 2.0649 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045022745 | 25.7 | 18.9 | sus_scrofa_landrace | ENSSSCP00045003548 | 37.9056 | 27.8761 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045040870 | 41.0256 | 20 | sus_scrofa_landrace | ENSSSCP00045003548 | 23.5988 | 11.5044 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045017463 | 10.0769 | 5.03843 | sus_scrofa_landrace | ENSSSCP00045003548 | 17.4041 | 8.70206 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045031480 | 17.1875 | 8.80682 | sus_scrofa_landrace | ENSSSCP00045003548 | 17.8466 | 9.14454 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045003548 | 96.1652 | 95.5752 | equus_caballus | ENSECAP00000080562 | 97.0238 | 96.4286 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045003548 | 100 | 100 | sus_scrofa | ENSSSCP00000005976 | 100 | 100 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045003548 | 100 | 100 | sus_scrofa_usmarc | ENSSSCP00070029036 | 100 | 100 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045003548 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030028426 | 100 | 100 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045003548 | 96.7552 | 96.4602 | sus_scrofa_wuzhishan | ENSSSCP00005034213 | 97.619 | 97.3214 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045003548 | 94.3953 | 94.2478 | sus_scrofa_jinhua | ENSSSCP00060046401 | 90.9091 | 90.767 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045003548 | 96.6077 | 95.7227 | bos_taurus | ENSBTAP00000029226 | 97.4702 | 96.5774 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045003548 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050045088 | 100 | 100 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045003548 | 96.4602 | 95.5752 | ovis_aries_rambouillet | ENSOARP00020014702 | 97.3214 | 96.4286 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045003548 | 94.5428 | 94.2478 | sus_scrofa_berkshire | ENSSSCP00065019717 | 91.8338 | 91.5473 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045003548 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035005660 | 100 | 100 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045003548 | 100 | 100 | sus_scrofa_meishan | ENSSSCP00040001758 | 100 | 100 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045003548 | 100 | 100 | sus_scrofa_tibetan | ENSSSCP00015027128 | 100 | 100 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045003548 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055047640 | 100 | 100 |
| ENSSSCG00045003135 | sus_scrofa_landrace | ENSSSCP00045003548 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025021611 | 100 | 100 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
