RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00040075623 | Gene ID |
|
Accession |
- |
Symbol |
G3BP1 |
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
39953 bases |
Strand |
Minus strand |
Position |
LUXQ01124826.1 : 245653 - 285605 |
RNA binding domain |
NTF2 , RRM_1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00040047927 |
NTF2 |
PF02136 |
4.7e-32 |
1 |
ENSSSCP00040047934 |
NTF2 |
PF02136 |
5.6e-32 |
1 |
ENSSSCP00040047934 |
RRM_1 |
PF00076 |
2.2e-12 |
2 |
ENSSSCP00040047923 |
NTF2 |
PF02136 |
5.6e-32 |
1 |
ENSSSCP00040047923 |
RRM_1 |
PF00076 |
1.4e-12 |
2 |
ENSSSCP00040047932 |
NTF2 |
PF02136 |
6.5e-32 |
1 |
ENSSSCP00040047932 |
RRM_1 |
PF00076 |
1.8e-12 |
2 |
ENSSSCP00040047938 |
NTF2 |
PF02136 |
7.3e-32 |
1 |
ENSSSCP00040047938 |
RRM_1 |
PF00076 |
1.9e-12 |
2 |
ENSSSCP00040047936 |
NTF2 |
PF02136 |
7.8e-32 |
1 |
ENSSSCP00040047936 |
RRM_1 |
PF00076 |
2e-12 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
G3BP1-201 |
ENSSSCT00040104960 |
1673 |
403aa |
ENSSSCP00040047923 |
G3BP1-202 |
ENSSSCT00040104965 |
2256 |
366aa |
ENSSSCP00040047927 |
G3BP1-203 |
ENSSSCT00040104970 |
2339 |
449aa |
ENSSSCP00040047932 |
G3BP1-204 |
ENSSSCT00040104972 |
3363 |
403aa |
ENSSSCP00040047934 |
G3BP1-205 |
ENSSSCT00040104974 |
2389 |
494aa |
ENSSSCP00040047936 |
G3BP1-206 |
ENSSSCT00040104976 |
2328 |
476aa |
ENSSSCP00040047938 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00040075623 | sus_scrofa_meishan | ENSSSCP00040045844 | 76.0915 | 66.1123 | sus_scrofa_meishan | ENSSSCP00040047936 | 74.0891 | 64.3725 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00040075623 | sus_scrofa_meishan | ENSSSCP00040047936 | 94.1296 | 94.1296 | sus_scrofa_usmarc | ENSSSCP00070018970 | 100 | 100 |
ENSSSCG00040075623 | sus_scrofa_meishan | ENSSSCP00040047936 | 98.3806 | 98.3806 | sus_scrofa_tibetan | ENSSSCP00015013300 | 100 | 100 |
ENSSSCG00040075623 | sus_scrofa_meishan | ENSSSCP00040047936 | 100 | 100 | sus_scrofa | ENSSSCP00000034840 | 99.798 | 99.798 |
ENSSSCG00040075623 | sus_scrofa_meishan | ENSSSCP00040047936 | 87.247 | 86.6397 | sus_scrofa_wuzhishan | ENSSSCP00005017409 | 82.8846 | 82.3077 |
ENSSSCG00040075623 | sus_scrofa_meishan | ENSSSCP00040047936 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065020799 | 100 | 100 |
ENSSSCG00040075623 | sus_scrofa_meishan | ENSSSCP00040047936 | 93.5223 | 91.498 | ovis_aries_rambouillet | ENSOARP00020027596 | 93.9024 | 91.8699 |
ENSSSCG00040075623 | sus_scrofa_meishan | ENSSSCP00040047936 | 92.915 | 91.9028 | ovis_aries_rambouillet | ENSOARP00020022102 | 98.7097 | 97.6344 |
ENSSSCG00040075623 | sus_scrofa_meishan | ENSSSCP00040047936 | 100 | 100 | sus_scrofa_jinhua | ENSSSCP00060036176 | 100 | 100 |
ENSSSCG00040075623 | sus_scrofa_meishan | ENSSSCP00040047936 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030004458 | 100 | 100 |
ENSSSCG00040075623 | sus_scrofa_meishan | ENSSSCP00040047936 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055023703 | 100 | 100 |
ENSSSCG00040075623 | sus_scrofa_meishan | ENSSSCP00040047936 | 95.9514 | 94.1296 | equus_caballus | ENSECAP00000066280 | 92.7593 | 90.998 |
ENSSSCG00040075623 | sus_scrofa_meishan | ENSSSCP00040047936 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025022726 | 100 | 100 |
ENSSSCG00040075623 | sus_scrofa_meishan | ENSSSCP00040047936 | 93.1174 | 92.1053 | bos_taurus | ENSBTAP00000027067 | 98.9247 | 97.8495 |
ENSSSCG00040075623 | sus_scrofa_meishan | ENSSSCP00040047936 | 98.3806 | 98.3806 | sus_scrofa_hampshire | ENSSSCP00035004257 | 100 | 100 |
ENSSSCG00040075623 | sus_scrofa_meishan | ENSSSCP00040047936 | 99.7976 | 99.7976 | sus_scrofa_bamei | ENSSSCP00050033922 | 99.7976 | 99.7976 |
ENSSSCG00040075623 | sus_scrofa_meishan | ENSSSCP00040047936 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045004337 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |