Description

Ensembl ID ENSSSCG00040075623 Gene ID Accession -
Symbol G3BP1 Alias - Full Name NA
Status Confidence Length 39953 bases Strand Minus strand
Position LUXQ01124826.1 : 245653 - 285605 RNA binding domain NTF2 , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00040047927 NTF2 PF02136 4.7e-32 1
ENSSSCP00040047934 NTF2 PF02136 5.6e-32 1
ENSSSCP00040047934 RRM_1 PF00076 2.2e-12 2
ENSSSCP00040047923 NTF2 PF02136 5.6e-32 1
ENSSSCP00040047923 RRM_1 PF00076 1.4e-12 2
ENSSSCP00040047932 NTF2 PF02136 6.5e-32 1
ENSSSCP00040047932 RRM_1 PF00076 1.8e-12 2
ENSSSCP00040047938 NTF2 PF02136 7.3e-32 1
ENSSSCP00040047938 RRM_1 PF00076 1.9e-12 2
ENSSSCP00040047936 NTF2 PF02136 7.8e-32 1
ENSSSCP00040047936 RRM_1 PF00076 2e-12 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
G3BP1-201 ENSSSCT00040104960 1673 403aa ENSSSCP00040047923
G3BP1-202 ENSSSCT00040104965 2256 366aa ENSSSCP00040047927
G3BP1-203 ENSSSCT00040104970 2339 449aa ENSSSCP00040047932
G3BP1-204 ENSSSCT00040104972 3363 403aa ENSSSCP00040047934
G3BP1-205 ENSSSCT00040104974 2389 494aa ENSSSCP00040047936
G3BP1-206 ENSSSCT00040104976 2328 476aa ENSSSCP00040047938

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00040075623sus_scrofa_meishanENSSSCP0004004584476.091566.1123sus_scrofa_meishanENSSSCP0004004793674.089164.3725

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00040075623sus_scrofa_meishanENSSSCP0004004793694.129694.1296sus_scrofa_usmarcENSSSCP00070018970100100
ENSSSCG00040075623sus_scrofa_meishanENSSSCP0004004793698.380698.3806sus_scrofa_tibetanENSSSCP00015013300100100
ENSSSCG00040075623sus_scrofa_meishanENSSSCP00040047936100100sus_scrofaENSSSCP0000003484099.79899.798
ENSSSCG00040075623sus_scrofa_meishanENSSSCP0004004793687.24786.6397sus_scrofa_wuzhishanENSSSCP0000501740982.884682.3077
ENSSSCG00040075623sus_scrofa_meishanENSSSCP00040047936100100sus_scrofa_berkshireENSSSCP00065020799100100
ENSSSCG00040075623sus_scrofa_meishanENSSSCP0004004793693.522391.498ovis_aries_rambouilletENSOARP0002002759693.902491.8699
ENSSSCG00040075623sus_scrofa_meishanENSSSCP0004004793692.91591.9028ovis_aries_rambouilletENSOARP0002002210298.709797.6344
ENSSSCG00040075623sus_scrofa_meishanENSSSCP00040047936100100sus_scrofa_jinhuaENSSSCP00060036176100100
ENSSSCG00040075623sus_scrofa_meishanENSSSCP00040047936100100sus_scrofa_rongchangENSSSCP00030004458100100
ENSSSCG00040075623sus_scrofa_meishanENSSSCP00040047936100100sus_scrofa_pietrainENSSSCP00055023703100100
ENSSSCG00040075623sus_scrofa_meishanENSSSCP0004004793695.951494.1296equus_caballusENSECAP0000006628092.759390.998
ENSSSCG00040075623sus_scrofa_meishanENSSSCP00040047936100100sus_scrofa_largewhiteENSSSCP00025022726100100
ENSSSCG00040075623sus_scrofa_meishanENSSSCP0004004793693.117492.1053bos_taurusENSBTAP0000002706798.924797.8495
ENSSSCG00040075623sus_scrofa_meishanENSSSCP0004004793698.380698.3806sus_scrofa_hampshireENSSSCP00035004257100100
ENSSSCG00040075623sus_scrofa_meishanENSSSCP0004004793699.797699.7976sus_scrofa_bameiENSSSCP0005003392299.797699.7976
ENSSSCG00040075623sus_scrofa_meishanENSSSCP00040047936100100sus_scrofa_landraceENSSSCP00045004337100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression