Description

Ensembl ID ENSSSCG00040067136 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 30255 bases Strand Plus strand
Position LUXQ01118525.1 : 880915 - 911169 RNA binding domain tRNA_anti-codon , tRNA-synt_2 , GAD
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00040040671 tRNA_anti-codon PF01336 8.3e-10 1
ENSSSCP00040040671 tRNA-synt_2 PF00152 2e-79 2
ENSSSCP00040040671 GAD PF02938 1e-12 3
ENSSSCP00040040499 tRNA_anti-codon PF01336 1e-09 1
ENSSSCP00040040499 tRNA-synt_2 PF00152 3.5e-94 2
ENSSSCP00040040499 GAD PF02938 1.2e-12 3
ENSSSCP00040040593 tRNA_anti-codon PF01336 8.9e-08 1
ENSSSCP00040040593 tRNA-synt_2 PF00152 3e-94 2
ENSSSCP00040040593 GAD PF02938 1.1e-12 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00040091793 3296 651aa ENSSSCP00040040499
- ENSSSCT00040091997 3200 619aa ENSSSCP00040040593
- ENSSSCT00040092180 3115 591aa ENSSSCP00040040671

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00040067136sus_scrofa_meishanENSSSCP0004003827225.155713.325sus_scrofa_meishanENSSSCP0004004049931.029216.4363
ENSSSCG00040067136sus_scrofa_meishanENSSSCP0004001121432.915919.678sus_scrofa_meishanENSSSCP0004004049928.264216.8971
ENSSSCG00040067136sus_scrofa_meishanENSSSCP0004000700139.41322.2222sus_scrofa_meishanENSSSCP0004004049928.878616.2826
ENSSSCG00040067136sus_scrofa_meishanENSSSCP0004000731137.551921.1618sus_scrofa_meishanENSSSCP0004004049927.803415.6682

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00040067136sus_scrofa_meishanENSSSCP0004004049997.849597.235sus_scrofa_usmarcENSSSCP0007002747099.37698.752
ENSSSCG00040067136sus_scrofa_meishanENSSSCP0004004049910099.6928sus_scrofa_tibetanENSSSCP0001504656310099.6928
ENSSSCG00040067136sus_scrofa_meishanENSSSCP0004004049996.774296.1598sus_scrofaENSSSCP0000003616010099.3651
ENSSSCG00040067136sus_scrofa_meishanENSSSCP0004004049910099.0783sus_scrofa_wuzhishanENSSSCP0000503356810099.0783
ENSSSCG00040067136sus_scrofa_meishanENSSSCP0004004049910099.3856sus_scrofa_berkshireENSSSCP0006500310610099.3856
ENSSSCG00040067136sus_scrofa_meishanENSSSCP0004004049994.777388.9401ovis_aries_rambouilletENSOARP0002001877794.631988.8037
ENSSSCG00040067136sus_scrofa_meishanENSSSCP0004004049910099.8464sus_scrofa_jinhuaENSSSCP0006002037510099.8464
ENSSSCG00040067136sus_scrofa_meishanENSSSCP0004004049910099.5392sus_scrofa_rongchangENSSSCP0003004624210099.5392
ENSSSCG00040067136sus_scrofa_meishanENSSSCP0004004049910099.3856sus_scrofa_pietrainENSSSCP0005502326610099.3856
ENSSSCG00040067136sus_scrofa_meishanENSSSCP0004004049995.238188.4793equus_caballusENSECAP0000000380892.814486.2275
ENSSSCG00040067136sus_scrofa_meishanENSSSCP0004004049910099.3856sus_scrofa_largewhiteENSSSCP0002503437110099.3856
ENSSSCG00040067136sus_scrofa_meishanENSSSCP0004004049994.930989.0937bos_taurusENSBTAP0000000570494.930989.0937
ENSSSCG00040067136sus_scrofa_meishanENSSSCP0004004049910099.3856sus_scrofa_hampshireENSSSCP0003502226910099.3856
ENSSSCG00040067136sus_scrofa_meishanENSSSCP0004004049910099.5392sus_scrofa_bameiENSSSCP0005000790610099.5392
ENSSSCG00040067136sus_scrofa_meishanENSSSCP0004004049910099.3856sus_scrofa_landraceENSSSCP0004502064510099.3856

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression