RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00040067136 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
30255 bases |
Strand |
Plus strand |
Position |
LUXQ01118525.1 : 880915 - 911169 |
RNA binding domain |
tRNA_anti-codon , tRNA-synt_2 , GAD |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00040040671 |
tRNA_anti-codon |
PF01336 |
8.3e-10 |
1 |
ENSSSCP00040040671 |
tRNA-synt_2 |
PF00152 |
2e-79 |
2 |
ENSSSCP00040040671 |
GAD |
PF02938 |
1e-12 |
3 |
ENSSSCP00040040499 |
tRNA_anti-codon |
PF01336 |
1e-09 |
1 |
ENSSSCP00040040499 |
tRNA-synt_2 |
PF00152 |
3.5e-94 |
2 |
ENSSSCP00040040499 |
GAD |
PF02938 |
1.2e-12 |
3 |
ENSSSCP00040040593 |
tRNA_anti-codon |
PF01336 |
8.9e-08 |
1 |
ENSSSCP00040040593 |
tRNA-synt_2 |
PF00152 |
3e-94 |
2 |
ENSSSCP00040040593 |
GAD |
PF02938 |
1.1e-12 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00040091793 |
3296 |
651aa |
ENSSSCP00040040499 |
- |
ENSSSCT00040091997 |
3200 |
619aa |
ENSSSCP00040040593 |
- |
ENSSSCT00040092180 |
3115 |
591aa |
ENSSSCP00040040671 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00040067136 | sus_scrofa_meishan | ENSSSCP00040038272 | 25.1557 | 13.325 | sus_scrofa_meishan | ENSSSCP00040040499 | 31.0292 | 16.4363 |
ENSSSCG00040067136 | sus_scrofa_meishan | ENSSSCP00040011214 | 32.9159 | 19.678 | sus_scrofa_meishan | ENSSSCP00040040499 | 28.2642 | 16.8971 |
ENSSSCG00040067136 | sus_scrofa_meishan | ENSSSCP00040007001 | 39.413 | 22.2222 | sus_scrofa_meishan | ENSSSCP00040040499 | 28.8786 | 16.2826 |
ENSSSCG00040067136 | sus_scrofa_meishan | ENSSSCP00040007311 | 37.5519 | 21.1618 | sus_scrofa_meishan | ENSSSCP00040040499 | 27.8034 | 15.6682 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00040067136 | sus_scrofa_meishan | ENSSSCP00040040499 | 97.8495 | 97.235 | sus_scrofa_usmarc | ENSSSCP00070027470 | 99.376 | 98.752 |
ENSSSCG00040067136 | sus_scrofa_meishan | ENSSSCP00040040499 | 100 | 99.6928 | sus_scrofa_tibetan | ENSSSCP00015046563 | 100 | 99.6928 |
ENSSSCG00040067136 | sus_scrofa_meishan | ENSSSCP00040040499 | 96.7742 | 96.1598 | sus_scrofa | ENSSSCP00000036160 | 100 | 99.3651 |
ENSSSCG00040067136 | sus_scrofa_meishan | ENSSSCP00040040499 | 100 | 99.0783 | sus_scrofa_wuzhishan | ENSSSCP00005033568 | 100 | 99.0783 |
ENSSSCG00040067136 | sus_scrofa_meishan | ENSSSCP00040040499 | 100 | 99.3856 | sus_scrofa_berkshire | ENSSSCP00065003106 | 100 | 99.3856 |
ENSSSCG00040067136 | sus_scrofa_meishan | ENSSSCP00040040499 | 94.7773 | 88.9401 | ovis_aries_rambouillet | ENSOARP00020018777 | 94.6319 | 88.8037 |
ENSSSCG00040067136 | sus_scrofa_meishan | ENSSSCP00040040499 | 100 | 99.8464 | sus_scrofa_jinhua | ENSSSCP00060020375 | 100 | 99.8464 |
ENSSSCG00040067136 | sus_scrofa_meishan | ENSSSCP00040040499 | 100 | 99.5392 | sus_scrofa_rongchang | ENSSSCP00030046242 | 100 | 99.5392 |
ENSSSCG00040067136 | sus_scrofa_meishan | ENSSSCP00040040499 | 100 | 99.3856 | sus_scrofa_pietrain | ENSSSCP00055023266 | 100 | 99.3856 |
ENSSSCG00040067136 | sus_scrofa_meishan | ENSSSCP00040040499 | 95.2381 | 88.4793 | equus_caballus | ENSECAP00000003808 | 92.8144 | 86.2275 |
ENSSSCG00040067136 | sus_scrofa_meishan | ENSSSCP00040040499 | 100 | 99.3856 | sus_scrofa_largewhite | ENSSSCP00025034371 | 100 | 99.3856 |
ENSSSCG00040067136 | sus_scrofa_meishan | ENSSSCP00040040499 | 94.9309 | 89.0937 | bos_taurus | ENSBTAP00000005704 | 94.9309 | 89.0937 |
ENSSSCG00040067136 | sus_scrofa_meishan | ENSSSCP00040040499 | 100 | 99.3856 | sus_scrofa_hampshire | ENSSSCP00035022269 | 100 | 99.3856 |
ENSSSCG00040067136 | sus_scrofa_meishan | ENSSSCP00040040499 | 100 | 99.5392 | sus_scrofa_bamei | ENSSSCP00050007906 | 100 | 99.5392 |
ENSSSCG00040067136 | sus_scrofa_meishan | ENSSSCP00040040499 | 100 | 99.3856 | sus_scrofa_landrace | ENSSSCP00045020645 | 100 | 99.3856 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |