Description

Ensembl ID ENSSSCG00040063856 Gene ID 100521452 Accession -
Symbol KARS Alias - Full Name lysyl-tRNA synthetase 1
Status Confidence Length 17170 bases Strand Plus strand
Position LUXQ01132774.1 : 896525 - 913694 RNA binding domain tRNA_anti-codon , tRNA-synt_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00040038346 tRNA_anti-codon PF01336 1.3e-14 1
ENSSSCP00040038346 tRNA-synt_2 PF00152 2.1e-80 2
ENSSSCP00040038272 tRNA_anti-codon PF01336 2.2e-14 1
ENSSSCP00040038272 tRNA-synt_2 PF00152 4.1e-80 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
KARS-201 ENSSSCT00040087151 2830 803aa ENSSSCP00040038272
KARS-202 ENSSSCT00040087301 2197 625aa ENSSSCP00040038346

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00040063856sus_scrofa_meishanENSSSCP0004004049931.029216.4363sus_scrofa_meishanENSSSCP0004003827225.155713.325
ENSSSCG00040063856sus_scrofa_meishanENSSSCP0004001121433.631516.2791sus_scrofa_meishanENSSSCP0004003827223.412211.3325
ENSSSCG00040063856sus_scrofa_meishanENSSSCP0004000700134.800817.4004sus_scrofa_meishanENSSSCP0004003827220.672510.3362
ENSSSCG00040063856sus_scrofa_meishanENSSSCP0004000731138.174318.8797sus_scrofa_meishanENSSSCP0004003827222.914111.3325

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00040063856sus_scrofa_meishanENSSSCP0004003827272.851871.9801sus_scrofa_usmarcENSSSCP0007000707993.692.48
ENSSSCG00040063856sus_scrofa_meishanENSSSCP0004003827210099.7509sus_scrofa_tibetanENSSSCP0001503918610099.7509
ENSSSCG00040063856sus_scrofa_meishanENSSSCP0004003827299.875599.6264sus_scrofaENSSSCP0000003838599.875599.6264
ENSSSCG00040063856sus_scrofa_meishanENSSSCP0004003827279.701179.5766sus_scrofa_wuzhishanENSSSCP0000502836899.84499.688
ENSSSCG00040063856sus_scrofa_meishanENSSSCP0004003827299.875599.7509sus_scrofa_berkshireENSSSCP0006501367799.875599.7509
ENSSSCG00040063856sus_scrofa_meishanENSSSCP0004003827271.108368.9913ovis_aries_rambouilletENSOARP0002002602691.653388.9246
ENSSSCG00040063856sus_scrofa_meishanENSSSCP0004003827210099.8755sus_scrofa_jinhuaENSSSCP0006000950110099.8755
ENSSSCG00040063856sus_scrofa_meishanENSSSCP0004003827210099.7509sus_scrofa_rongchangENSSSCP0003004672710099.7509
ENSSSCG00040063856sus_scrofa_meishanENSSSCP0004003827299.875599.6264sus_scrofa_pietrainENSSSCP0005500861499.875599.6264
ENSSSCG00040063856sus_scrofa_meishanENSSSCP0004003827269.738567.2478equus_caballusENSECAP0000004900789.686.4
ENSSSCG00040063856sus_scrofa_meishanENSSSCP00040038272100100sus_scrofa_largewhiteENSSSCP00025043710100100
ENSSSCG00040063856sus_scrofa_meishanENSSSCP0004003827290.037486.924bos_taurusENSBTAP0000002081893.050289.8327
ENSSSCG00040063856sus_scrofa_meishanENSSSCP0004003827299.875599.6264sus_scrofa_hampshireENSSSCP0003500342399.875599.6264
ENSSSCG00040063856sus_scrofa_meishanENSSSCP0004003827210099.7509sus_scrofa_bameiENSSSCP0005003927810099.7509
ENSSSCG00040063856sus_scrofa_meishanENSSSCP0004003827299.875599.7509sus_scrofa_landraceENSSSCP0004503017699.875599.7509

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression