RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00040063856 | Gene ID |
100521452 |
Accession |
- |
Symbol |
KARS |
Alias |
- |
Full Name |
lysyl-tRNA synthetase 1 |
Status |
Confidence |
Length |
17170 bases |
Strand |
Plus strand |
Position |
LUXQ01132774.1 : 896525 - 913694 |
RNA binding domain |
tRNA_anti-codon , tRNA-synt_2 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00040038346 |
tRNA_anti-codon |
PF01336 |
1.3e-14 |
1 |
ENSSSCP00040038346 |
tRNA-synt_2 |
PF00152 |
2.1e-80 |
2 |
ENSSSCP00040038272 |
tRNA_anti-codon |
PF01336 |
2.2e-14 |
1 |
ENSSSCP00040038272 |
tRNA-synt_2 |
PF00152 |
4.1e-80 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
KARS-201 |
ENSSSCT00040087151 |
2830 |
803aa |
ENSSSCP00040038272 |
KARS-202 |
ENSSSCT00040087301 |
2197 |
625aa |
ENSSSCP00040038346 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00040063856 | sus_scrofa_meishan | ENSSSCP00040040499 | 31.0292 | 16.4363 | sus_scrofa_meishan | ENSSSCP00040038272 | 25.1557 | 13.325 |
ENSSSCG00040063856 | sus_scrofa_meishan | ENSSSCP00040011214 | 33.6315 | 16.2791 | sus_scrofa_meishan | ENSSSCP00040038272 | 23.4122 | 11.3325 |
ENSSSCG00040063856 | sus_scrofa_meishan | ENSSSCP00040007001 | 34.8008 | 17.4004 | sus_scrofa_meishan | ENSSSCP00040038272 | 20.6725 | 10.3362 |
ENSSSCG00040063856 | sus_scrofa_meishan | ENSSSCP00040007311 | 38.1743 | 18.8797 | sus_scrofa_meishan | ENSSSCP00040038272 | 22.9141 | 11.3325 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00040063856 | sus_scrofa_meishan | ENSSSCP00040038272 | 72.8518 | 71.9801 | sus_scrofa_usmarc | ENSSSCP00070007079 | 93.6 | 92.48 |
ENSSSCG00040063856 | sus_scrofa_meishan | ENSSSCP00040038272 | 100 | 99.7509 | sus_scrofa_tibetan | ENSSSCP00015039186 | 100 | 99.7509 |
ENSSSCG00040063856 | sus_scrofa_meishan | ENSSSCP00040038272 | 99.8755 | 99.6264 | sus_scrofa | ENSSSCP00000038385 | 99.8755 | 99.6264 |
ENSSSCG00040063856 | sus_scrofa_meishan | ENSSSCP00040038272 | 79.7011 | 79.5766 | sus_scrofa_wuzhishan | ENSSSCP00005028368 | 99.844 | 99.688 |
ENSSSCG00040063856 | sus_scrofa_meishan | ENSSSCP00040038272 | 99.8755 | 99.7509 | sus_scrofa_berkshire | ENSSSCP00065013677 | 99.8755 | 99.7509 |
ENSSSCG00040063856 | sus_scrofa_meishan | ENSSSCP00040038272 | 71.1083 | 68.9913 | ovis_aries_rambouillet | ENSOARP00020026026 | 91.6533 | 88.9246 |
ENSSSCG00040063856 | sus_scrofa_meishan | ENSSSCP00040038272 | 100 | 99.8755 | sus_scrofa_jinhua | ENSSSCP00060009501 | 100 | 99.8755 |
ENSSSCG00040063856 | sus_scrofa_meishan | ENSSSCP00040038272 | 100 | 99.7509 | sus_scrofa_rongchang | ENSSSCP00030046727 | 100 | 99.7509 |
ENSSSCG00040063856 | sus_scrofa_meishan | ENSSSCP00040038272 | 99.8755 | 99.6264 | sus_scrofa_pietrain | ENSSSCP00055008614 | 99.8755 | 99.6264 |
ENSSSCG00040063856 | sus_scrofa_meishan | ENSSSCP00040038272 | 69.7385 | 67.2478 | equus_caballus | ENSECAP00000049007 | 89.6 | 86.4 |
ENSSSCG00040063856 | sus_scrofa_meishan | ENSSSCP00040038272 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025043710 | 100 | 100 |
ENSSSCG00040063856 | sus_scrofa_meishan | ENSSSCP00040038272 | 90.0374 | 86.924 | bos_taurus | ENSBTAP00000020818 | 93.0502 | 89.8327 |
ENSSSCG00040063856 | sus_scrofa_meishan | ENSSSCP00040038272 | 99.8755 | 99.6264 | sus_scrofa_hampshire | ENSSSCP00035003423 | 99.8755 | 99.6264 |
ENSSSCG00040063856 | sus_scrofa_meishan | ENSSSCP00040038272 | 100 | 99.7509 | sus_scrofa_bamei | ENSSSCP00050039278 | 100 | 99.7509 |
ENSSSCG00040063856 | sus_scrofa_meishan | ENSSSCP00040038272 | 99.8755 | 99.7509 | sus_scrofa_landrace | ENSSSCP00045030176 | 99.8755 | 99.7509 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |