| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00040062330 | Gene ID |
100524172 |
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
UTP6 small subunit processome component |
| Status |
Confidence |
Length |
27968 bases |
Strand |
Minus strand |
| Position |
LUXQ01133650.1 : 1487565 - 1515532 |
RNA binding domain |
U3_assoc_6 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00040037126 |
U3_assoc_6 |
PF08640 |
2.9e-05 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00040084880 |
3463 |
563aa |
ENSSSCP00040037064 |
| - |
ENSSSCT00040085012 |
2834 |
543aa |
ENSSSCP00040037126 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00040062330 | | | | | | | | |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00040062330 | sus_scrofa_meishan | ENSSSCP00040037064 | 100 | 100 | sus_scrofa_usmarc | ENSSSCP00070015713 | 94.1472 | 94.1472 |
| ENSSSCG00040062330 | sus_scrofa_meishan | ENSSSCP00040037064 | 100 | 99.8224 | sus_scrofa_tibetan | ENSSSCP00015003568 | 94.1472 | 93.9799 |
| ENSSSCG00040062330 | sus_scrofa_meishan | ENSSSCP00040037064 | 99.8224 | 99.8224 | sus_scrofa | ENSSSCP00000041885 | 93.9799 | 93.9799 |
| ENSSSCG00040062330 | sus_scrofa_meishan | ENSSSCP00040037064 | 99.1119 | 99.1119 | sus_scrofa_wuzhishan | ENSSSCP00005022920 | 93.9394 | 93.9394 |
| ENSSSCG00040062330 | sus_scrofa_meishan | ENSSSCP00040037064 | 100 | 99.8224 | sus_scrofa_berkshire | ENSSSCP00065033844 | 94.1472 | 93.9799 |
| ENSSSCG00040062330 | sus_scrofa_meishan | ENSSSCP00040037064 | 89.8757 | 77.7975 | ovis_aries_rambouillet | ENSOARP00020003510 | 84.6154 | 73.2441 |
| ENSSSCG00040062330 | sus_scrofa_meishan | ENSSSCP00040037064 | 81.3499 | 69.2718 | ovis_aries_rambouillet | ENSOARP00020004698 | 79.9302 | 68.0628 |
| ENSSSCG00040062330 | sus_scrofa_meishan | ENSSSCP00040037064 | 89.8757 | 77.7975 | ovis_aries_rambouillet | ENSOARP00020014273 | 84.6154 | 73.2441 |
| ENSSSCG00040062330 | sus_scrofa_meishan | ENSSSCP00040037064 | 100 | 99.8224 | sus_scrofa_jinhua | ENSSSCP00060040854 | 94.1472 | 93.9799 |
| ENSSSCG00040062330 | sus_scrofa_meishan | ENSSSCP00040037064 | 100 | 99.6448 | sus_scrofa_rongchang | ENSSSCP00030040228 | 85.0453 | 84.7432 |
| ENSSSCG00040062330 | sus_scrofa_meishan | ENSSSCP00040037064 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055009065 | 94.1472 | 94.1472 |
| ENSSSCG00040062330 | sus_scrofa_meishan | ENSSSCP00040037064 | 93.4281 | 88.4547 | equus_caballus | ENSECAP00000046767 | 71.4674 | 67.663 |
| ENSSSCG00040062330 | sus_scrofa_meishan | ENSSSCP00040037064 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025038015 | 94.1472 | 94.1472 |
| ENSSSCG00040062330 | sus_scrofa_meishan | ENSSSCP00040037064 | 87.9218 | 75.6661 | bos_taurus | ENSBTAP00000067167 | 81.4145 | 70.0658 |
| ENSSSCG00040062330 | sus_scrofa_meishan | ENSSSCP00040037064 | 89.3428 | 77.4423 | bos_taurus | ENSBTAP00000020740 | 84.1137 | 72.9097 |
| ENSSSCG00040062330 | sus_scrofa_meishan | ENSSSCP00040037064 | 21.1368 | 17.0515 | bos_taurus | ENSBTAP00000065831 | 62.6316 | 50.5263 |
| ENSSSCG00040062330 | sus_scrofa_meishan | ENSSSCP00040037064 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035040932 | 94.1472 | 94.1472 |
| ENSSSCG00040062330 | sus_scrofa_meishan | ENSSSCP00040037064 | 100 | 99.8224 | sus_scrofa_bamei | ENSSSCP00050029778 | 85.0453 | 84.8943 |
| ENSSSCG00040062330 | sus_scrofa_meishan | ENSSSCP00040037064 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045028244 | 94.1472 | 94.1472 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
