| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00040060204 | Gene ID |
102162257 |
Accession |
- |
| Symbol |
TDRD12 |
Alias |
- |
Full Name |
tudor domain containing 12 |
| Status |
Confidence |
Length |
78239 bases |
Strand |
Minus strand |
| Position |
LUXQ01044362.1 : 816548 - 894786 |
RNA binding domain |
DEAD , TUDOR |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00040035627 |
DEAD |
PF00270 |
1.4e-06 |
1 |
| ENSSSCP00040035627 |
TUDOR |
PF00567 |
2.3e-28 |
2 |
| ENSSSCP00040035627 |
TUDOR |
PF00567 |
2.3e-28 |
3 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| TDRD12-201 |
ENSSSCT00040081892 |
6225 |
1304aa |
ENSSSCP00040035627 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040015031 | 34.6856 | 15.4158 | sus_scrofa_meishan | ENSSSCP00040035627 | 13.1135 | 5.82822 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040045067 | 30.0131 | 14.5478 | sus_scrofa_meishan | ENSSSCP00040035627 | 17.5613 | 8.51227 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040015243 | 25.7212 | 11.1779 | sus_scrofa_meishan | ENSSSCP00040035627 | 16.411 | 7.1319 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040004313 | 32.5103 | 15.0892 | sus_scrofa_meishan | ENSSSCP00040035627 | 18.1748 | 8.43558 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040012212 | 28.9438 | 13.9918 | sus_scrofa_meishan | ENSSSCP00040035627 | 16.181 | 7.82209 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040000799 | 33.2815 | 16.4852 | sus_scrofa_meishan | ENSSSCP00040035627 | 16.411 | 8.12883 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040032822 | 23.0975 | 10.9479 | sus_scrofa_meishan | ENSSSCP00040035627 | 13.2669 | 6.28834 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040034854 | 25.3505 | 11.5654 | sus_scrofa_meishan | ENSSSCP00040035627 | 16.6411 | 7.59202 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040002163 | 35.3704 | 18.3333 | sus_scrofa_meishan | ENSSSCP00040035627 | 14.6472 | 7.59202 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040011183 | 28.699 | 12.5 | sus_scrofa_meishan | ENSSSCP00040035627 | 17.2546 | 7.51534 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040008594 | 33.7474 | 13.4576 | sus_scrofa_meishan | ENSSSCP00040035627 | 12.5 | 4.98466 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040021561 | 27.5313 | 12.5142 | sus_scrofa_meishan | ENSSSCP00040035627 | 18.5583 | 8.43558 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040044791 | 34.3598 | 14.9109 | sus_scrofa_meishan | ENSSSCP00040035627 | 16.2577 | 7.05521 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040041321 | 37.8378 | 17.199 | sus_scrofa_meishan | ENSSSCP00040035627 | 11.8098 | 5.3681 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040008095 | 26.2343 | 12.6815 | sus_scrofa_meishan | ENSSSCP00040035627 | 20.7822 | 10.046 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040011316 | 33.8095 | 16.5079 | sus_scrofa_meishan | ENSSSCP00040035627 | 16.3344 | 7.97546 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040006199 | 35.2505 | 14.4712 | sus_scrofa_meishan | ENSSSCP00040035627 | 14.5706 | 5.9816 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040025409 | 29.3893 | 14.5038 | sus_scrofa_meishan | ENSSSCP00040035627 | 17.7147 | 8.74233 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040019812 | 28.0502 | 13.2269 | sus_scrofa_meishan | ENSSSCP00040035627 | 18.865 | 8.89571 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040019241 | 33.6667 | 15.3333 | sus_scrofa_meishan | ENSSSCP00040035627 | 15.4908 | 7.05521 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040027849 | 30.313 | 15.1565 | sus_scrofa_meishan | ENSSSCP00040035627 | 14.1104 | 7.05521 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040021180 | 28.6585 | 14.1463 | sus_scrofa_meishan | ENSSSCP00040035627 | 18.0215 | 8.89571 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040011258 | 28.7263 | 13.0081 | sus_scrofa_meishan | ENSSSCP00040035627 | 16.2577 | 7.36196 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040026397 | 24.2295 | 11.2646 | sus_scrofa_meishan | ENSSSCP00040035627 | 17.4847 | 8.12883 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040048633 | 34.0637 | 18.3267 | sus_scrofa_meishan | ENSSSCP00040035627 | 13.1135 | 7.05521 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040048566 | 30.217 | 13.1886 | sus_scrofa_meishan | ENSSSCP00040035627 | 13.8804 | 6.05828 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040037621 | 34.9896 | 17.1843 | sus_scrofa_meishan | ENSSSCP00040035627 | 12.9601 | 6.36503 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040007687 | 31.8681 | 14.4689 | sus_scrofa_meishan | ENSSSCP00040035627 | 13.3436 | 6.05828 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040037886 | 33.9545 | 16.9772 | sus_scrofa_meishan | ENSSSCP00040035627 | 12.5767 | 6.28834 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040016238 | 30.7692 | 13.5747 | sus_scrofa_meishan | ENSSSCP00040035627 | 15.6442 | 6.90184 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040032846 | 36.7397 | 18.0049 | sus_scrofa_meishan | ENSSSCP00040035627 | 11.5798 | 5.67485 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040043525 | 29.3431 | 14.1606 | sus_scrofa_meishan | ENSSSCP00040035627 | 15.4141 | 7.43865 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040009966 | 37.6847 | 17.9803 | sus_scrofa_meishan | ENSSSCP00040035627 | 11.7331 | 5.59816 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040043035 | 30.6604 | 13.9151 | sus_scrofa_meishan | ENSSSCP00040035627 | 9.96933 | 4.52454 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040029124 | 28.5271 | 13.7984 | sus_scrofa_meishan | ENSSSCP00040035627 | 14.1104 | 6.82515 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040043904 | 37.6168 | 19.8598 | sus_scrofa_meishan | ENSSSCP00040035627 | 12.3466 | 6.5184 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040035627 | 100 | 100 | sus_scrofa_usmarc | ENSSSCP00070018408 | 100 | 100 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040035627 | 100 | 100 | sus_scrofa_tibetan | ENSSSCP00015031596 | 100 | 100 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040035627 | 92.7914 | 92.7147 | sus_scrofa | ENSSSCP00000003077 | 99.3432 | 99.2611 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040035627 | 100 | 100 | sus_scrofa_wuzhishan | ENSSSCP00005030541 | 100 | 100 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040035627 | 100 | 99.9233 | sus_scrofa_berkshire | ENSSSCP00065034451 | 100 | 99.9233 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040035627 | 90.3374 | 83.3589 | ovis_aries_rambouillet | ENSOARP00020013388 | 91.8161 | 84.7233 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040035627 | 99.9233 | 99.9233 | sus_scrofa_jinhua | ENSSSCP00060031538 | 99.9233 | 99.9233 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040035627 | 99.9233 | 99.9233 | sus_scrofa_rongchang | ENSSSCP00030003629 | 99.9233 | 99.9233 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040035627 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055034949 | 100 | 100 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040035627 | 89.8773 | 81.9785 | equus_caballus | ENSECAP00000052269 | 78.3946 | 71.505 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040035627 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025024257 | 100 | 100 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040035627 | 23.8497 | 21.7791 | bos_taurus | ENSBTAP00000042564 | 93.1138 | 85.0299 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040035627 | 99.9233 | 99.9233 | sus_scrofa_hampshire | ENSSSCP00035026426 | 99.9233 | 99.9233 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040035627 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050044756 | 100 | 100 |
| ENSSSCG00040060204 | sus_scrofa_meishan | ENSSSCP00040035627 | 100 | 99.9233 | sus_scrofa_landrace | ENSSSCP00045049001 | 100 | 99.9233 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
